Mercurial > repos > azomics > flclr_sample_name

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"planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
author azomics
date Thu, 23 Jul 2020 07:50:53 -0400
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fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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1 <tool id="flclr_sample_name" name="Add sample information and merge" version="1.0+galaxy1" profile="18.01">
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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2 <description>a flow clustered or tabular text file collection.</description>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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3 <requirements>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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4 <requirement type="package" version="4.4">sed</requirement>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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5 </requirements>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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6 <stdio>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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7 <exit_code range="1:" level="fatal" description="See stderr for more details." />
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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8 </stdio>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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9 <command><![CDATA[
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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10 #set $first = $inputs[0]
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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11 head -n 1 '$first' | sed "s/\$/\t$header/" > '$output';
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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12
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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13 #if $sample_names
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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14 #set $identifiers = [ x.strip() for x in $sample_names.split(",") ]
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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15 #else
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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16 #set $identifiers = [ i.element_identifier for i in $inputs ]
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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17 #end if
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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18
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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19 #if len($identifiers) != len($inputs)
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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20 # echo "Error, number of file identifiers/samples doesn't match the number of files.";
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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21 # exit(1)
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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22 #end if
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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23
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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24 #for $i, $input in enumerate($inputs)
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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25 tail -n +2 '$input' | sed "s/\$/\t$identifiers[$i]/" >> '$output';
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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26 #end for#
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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27 ]]>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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28 </command>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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29 <inputs>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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30 <param name="inputs" format="flowclr,tabular" type="data" multiple="true" min="2" label="Clustered flowtext or tabular file collection"/>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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31 <param name="sample_names" type="text" label="Sample names" optional="true" help="Supply the sample names of each flowtext file in order of the flowtext files in the data collection, comma separated, to override the collection identifier. Please see below for more information on formatting."/>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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32 <param name="header" type="text" value="Sample" optional="true" label="Column name for identifier" help="Sample by default, names the new column added with the identifier for each file."/>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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33 </inputs>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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34 <outputs>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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35 <data format="flowtext" name="output" label="Merged output"/>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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36 </outputs>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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37 <tests>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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38 <test>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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39 <param name="inputs" value="input1.flowclr,input2.flowclr,input3.flowclr"/>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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40 <output name="output" file="output1.flowtext"/>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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41 </test>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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42 <test>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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43 <param name="inputs" value="input1.flowclr,input2.flowclr,input3.flowclr"/>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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44 <param name="sample_names" value="S1,S2,S3"/>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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45 <output name="output" file="output2.flowtext"/>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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46 </test>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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47 </tests>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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48 <help><![CDATA[
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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49 Flowclr Sample Name
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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50 -------------------
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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51
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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52 This tool adds a column to a tabular file (including a flowtext or flowclustered file) with the sample information.
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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53
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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54 **Input files**
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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55 This tool requires a valid collection of tabular files such as flowtext files or clustered flowtext files. Files are processed serially.
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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56
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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57 .. class:: warningmark
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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58
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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59 By default the full file name will be used as sample name. Alternatively file names can be manually changed prior to running this tool.
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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60 If inputing sample names manually, then you must supply a comma separated list of sample names in order of the files in the dataset collection.
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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61
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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62 **Output file**
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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63 The output is a single merged tabular file (e.g. flowtext file) containing rows for each input tabular file; with a column containing the sample information
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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64
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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65 -----
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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66
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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67 **Example**
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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69 *File 1*::
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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70
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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71 FSC SSC Marker1 Marker2 Marker3 Marker4 Population
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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72 449 157 551 129 169 292 1
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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73 894 1023 199 277 320 227 3
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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74 262 73 437 69 0 146 6
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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75 340 115 509 268 0 74 1
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
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diff changeset
76 ... ... ... ... ... ... ...
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
77
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
78 *File 2*::
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
79
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
80 FSC SSC Marker1 Marker2 Marker3 Marker4 Population
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
81 523 354 554 176 213 185 2
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
82 678 8096 98 74 417 267 6
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
83 226 89 467 123 0 324 2
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
84 660 175 589 178 1 89 7
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
85 ... ... ... ... ... ... ...
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
86
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
87 *Output*::
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
88
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
89 FSC SSC Marker1 Marker2 Marker3 Marker4 Population Sample
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
90 449 157 551 129 169 292 1 sample1
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
91 894 1023 199 277 320 227 3 sample1
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
92 262 73 437 69 0 146 6 sample1
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
93 340 115 509 268 0 74 1 sample1
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
94 ... ... ... ... ... ... ... ...
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
95 523 354 554 176 213 185 2 sample2
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
96 678 8096 98 74 417 267 6 sample2
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
97 226 89 467 123 0 324 2 sample2
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
98 660 175 589 178 1 89 7 sample2
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
99 ... ... ... ... ... ... ... ...
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
100 ]]>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
101 </help>
fddd754b8bcb "planemo upload for repository https://github.com/AstraZeneca-Omics/immport-galaxy-tools/tree/develop/flowtools/flowclr_sample_name commit 0d94c83066ae8396ffa2821a6cb751ed471e7bf5"
azomics
parents:
diff changeset
102 </tool>