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comparison cdhit_macros.xml @ 1:93f25d52cfa5 draft default tip

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/cdhit/ commit 4a97d14fadd86dda8abd088023c7f9f2dcab2a88
author bebatut
date Fri, 04 May 2018 05:42:37 -0400
parents 54d811ad2b52
children
comparison
equal deleted inserted replaced
0:54d811ad2b52 1:93f25d52cfa5
28 -S $advanced.aa_cutoff_diff_len 28 -S $advanced.aa_cutoff_diff_len
29 #end if 29 #end if
30 30
31 #if $advanced.align.style == 'local': 31 #if $advanced.align.style == 'local':
32 -G 0 32 -G 0
33 #if str($advance.align.align_coverage_long) != 'None': 33 #if str($advanced.align.align_coverage_long) != 'None':
34 -aL $advance.align.align_coverage_long 34 -aL $advanced.align.align_coverage_long
35 #end if 35 #end if
36 36
37 #if str($advance.align.align_coverage_long_control) != 'None': 37 #if str($advanced.align.align_coverage_long_control) != 'None':
38 -AL $advance.align.align_coverage_long_control 38 -AL $advanced.align.align_coverage_long_control
39 #end if 39 #end if
40 40
41 #if str($advance.aling.align_coverage_short) != 'None': 41 #if str($advanced.aling.align_coverage_short) != 'None':
42 -aS $advance.align.align_coverage_short 42 -aS $advanced.align.align_coverage_short
43 #end if 43 #end if
44 44
45 #if str($advance.aling.align_coverage_short_control) != 'None': 45 #if str($advanced.aling.align_coverage_short_control) != 'None':
46 -AS $advance.align.align_coverage_short_control 46 -AS $advanced.align.align_coverage_short_control
47 #end if 47 #end if
48 48
49 #if str($advance.align.align_coverage_min) != 'None': 49 #if str($advanced.align.align_coverage_min) != 'None':
50 -A $advance.align.aling_coverage_min 50 -A $advanced.align.aling_coverage_min
51 #end if 51 #end if
52 #end if 52 #end if
53 #end if 53 #end if
54 54
55 #if $print_alignment: 55 #if $print_alignment: