view README.rst @ 0:54d811ad2b52 draft

planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/cdhit/ commit ea0424ae045ac797c080aeabab9a8536f7eb2f84-dirty
author bebatut
date Mon, 25 Apr 2016 12:15:23 -0400
parents
children
line wrap: on
line source

CD_HIT memory usage
====================

By default, maximum of 4Gb is attributed to CD_HIT.

To change the maximum memory usage, you can edit the CD_HIT_MEM_OPTIONS in the file:

<tool_dependency_dir>/cd-hit/4.6.4/bebatut/cdhit/<hash_string>/env.sh

For example to increase to 8Gb, you will write:

CD_HIT_MEM_OPTIONS='-M 8000'