Mercurial > repos > bebatut > format_metaphlan2_output
comparison test-data/all_taxo_level_abundance.txt @ 0:2bfa9b200600 draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/format_metaphlan2_output/ commit 36388cac89e4ffa55fe317d10cbf97346ab00a71-dirty
| author | bebatut |
|---|---|
| date | Wed, 20 Apr 2016 07:52:41 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:2bfa9b200600 |
|---|---|
| 1 kingdom phylum class order family genus species strains abundance | |
| 2 Bacteria 99.20573 | |
| 3 Archaea 0.79427 | |
| 4 Bacteria Deinococcus Thermus 45.20297 | |
| 5 Bacteria Firmicutes 19.15406 | |
| 6 Bacteria Proteobacteria 16.57369 | |
| 7 Bacteria Actinobacteria 10.37863 | |
| 8 Bacteria Bacteroidetes 7.89639 | |
| 9 Archaea Euryarchaeota 0.79427 | |
| 10 Bacteria Deinococcus Thermus Deinococci 45.20297 | |
| 11 Bacteria Firmicutes Bacilli 17.33469 | |
| 12 Bacteria Actinobacteria Actinobacteria 10.37863 | |
| 13 Bacteria Proteobacteria Gammaproteobacteria 8.28554 | |
| 14 Bacteria Bacteroidetes Bacteroidia 7.89639 | |
| 15 Bacteria Proteobacteria Epsilonproteobacteria 4.03024 | |
| 16 Bacteria Proteobacteria Betaproteobacteria 3.73739 | |
| 17 Bacteria Firmicutes Clostridia 1.81937 | |
| 18 Archaea Euryarchaeota Methanobacteria 0.79427 | |
| 19 Bacteria Proteobacteria Alphaproteobacteria 0.52051 | |
| 20 Bacteria Deinococcus Thermus Deinococci Deinococcales 45.20297 | |
| 21 Bacteria Actinobacteria Actinobacteria Actinomycetales 10.37863 | |
| 22 Bacteria Firmicutes Bacilli Bacillales 9.19153 | |
| 23 Bacteria Firmicutes Bacilli Lactobacillales 8.14315 | |
| 24 Bacteria Bacteroidetes Bacteroidia Bacteroidales 7.89639 | |
| 25 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales 6.58945 | |
| 26 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales 4.03024 | |
| 27 Bacteria Proteobacteria Betaproteobacteria Neisseriales 3.73739 | |
| 28 Bacteria Firmicutes Clostridia Clostridiales 1.81937 | |
| 29 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales 1.6961 | |
| 30 Archaea Euryarchaeota Methanobacteria Methanobacteriales 0.79427 | |
| 31 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales 0.52051 | |
| 32 Bacteria Deinococcus Thermus Deinococci Deinococcales Deinococcaceae 45.20297 | |
| 33 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae 7.89639 | |
| 34 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae 7.4516 | |
| 35 Bacteria Actinobacteria Actinobacteria Actinomycetales Propionibacteriaceae 6.71696 | |
| 36 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae 6.43313 | |
| 37 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae 5.88648 | |
| 38 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae 4.03024 | |
| 39 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae 3.73739 | |
| 40 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae 3.66166 | |
| 41 Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae 1.81937 | |
| 42 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae 1.71002 | |
| 43 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae 1.6961 | |
| 44 Bacteria Firmicutes Bacilli Bacillales Listeriaceae 1.58307 | |
| 45 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae 0.79427 | |
| 46 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae 0.70297 | |
| 47 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae 0.52051 | |
| 48 Bacteria Firmicutes Bacilli Bacillales Bacillaceae 0.15687 | |
| 49 Bacteria Deinococcus Thermus Deinococci Deinococcales Deinococcaceae Deinococcus 45.20297 | |
| 50 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae Bacteroides 7.89639 | |
| 51 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus 7.4516 | |
| 52 Bacteria Actinobacteria Actinobacteria Actinomycetales Propionibacteriaceae Propionibacterium 6.71696 | |
| 53 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus 6.43313 | |
| 54 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter 5.88648 | |
| 55 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter 4.03024 | |
| 56 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria 3.73739 | |
| 57 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces 3.66166 | |
| 58 Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium 1.81937 | |
| 59 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus 1.71002 | |
| 60 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia 1.6961 | |
| 61 Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria 1.58307 | |
| 62 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter 0.79427 | |
| 63 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas 0.70297 | |
| 64 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Rhodobacter 0.52051 | |
| 65 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus 0.15687 | |
| 66 Bacteria Deinococcus Thermus Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiodurans 45.20297 | |
| 67 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides vulgatus 7.89639 | |
| 68 Bacteria Actinobacteria Actinobacteria Actinomycetales Propionibacteriaceae Propionibacterium Propionibacterium acnes 6.71696 | |
| 69 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter Acinetobacter baumannii 5.88648 | |
| 70 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus epidermidis 4.54517 | |
| 71 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori 4.03024 | |
| 72 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mitis oralis pneumoniae 4.02995 | |
| 73 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria meningitidis 3.73739 | |
| 74 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces Actinomyces odontolyticus 3.66166 | |
| 75 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus 2.90642 | |
| 76 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mutans 2.35195 | |
| 77 Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium beijerinckii 1.81937 | |
| 78 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecalis 1.71002 | |
| 79 Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria monocytogenes 1.58307 | |
| 80 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia Escherichia coli 0.89751 | |
| 81 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia Escherichia unclassified 0.79859 | |
| 82 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas unclassified 0.55542 | |
| 83 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii 0.55066 | |
| 84 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Rhodobacter Rhodobacter sphaeroides 0.52051 | |
| 85 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter unclassified 0.24361 | |
| 86 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus cereus thuringiensis 0.15687 | |
| 87 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa 0.14755 | |
| 88 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus agalactiae 0.05124 | |
| 89 Bacteria Deinococcus Thermus Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiodurans GCF 000008565 45.20297 | |
| 90 Bacteria Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides vulgatus GCF 000012825 7.89639 | |
| 91 Bacteria Actinobacteria Actinobacteria Actinomycetales Propionibacteriaceae Propionibacterium Propionibacterium acnes Propionibacterium acnes unclassified 6.71696 | |
| 92 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Moraxellaceae Acinetobacter Acinetobacter baumannii Acinetobacter baumannii unclassified 5.88648 | |
| 93 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus epidermidis Staphylococcus epidermidis unclassified 4.54517 | |
| 94 Bacteria Proteobacteria Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori Helicobacter pylori unclassified 4.03024 | |
| 95 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mitis oralis pneumoniae Streptococcus mitis oralis pneumoniae unclassified 4.02995 | |
| 96 Bacteria Proteobacteria Betaproteobacteria Neisseriales Neisseriaceae Neisseria Neisseria meningitidis Neisseria meningitidis unclassified 3.73739 | |
| 97 Bacteria Actinobacteria Actinobacteria Actinomycetales Actinomycetaceae Actinomyces Actinomyces odontolyticus Actinomyces odontolyticus unclassified 3.66166 | |
| 98 Bacteria Firmicutes Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus Staphylococcus aureus unclassified 2.90642 | |
| 99 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mutans Streptococcus mutans unclassified 2.35195 | |
| 100 Bacteria Firmicutes Clostridia Clostridiales Clostridiaceae Clostridium Clostridium beijerinckii Clostridium beijerinckii unclassified 1.81937 | |
| 101 Bacteria Firmicutes Bacilli Lactobacillales Enterococcaceae Enterococcus Enterococcus faecalis Enterococcus faecalis unclassified 1.71002 | |
| 102 Bacteria Firmicutes Bacilli Bacillales Listeriaceae Listeria Listeria monocytogenes Listeria monocytogenes unclassified 1.58307 | |
| 103 Bacteria Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae Escherichia Escherichia coli Escherichia coli unclassified 0.89751 | |
| 104 Archaea Euryarchaeota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii Methanobrevibacter smithii unclassified 0.55066 | |
| 105 Bacteria Proteobacteria Alphaproteobacteria Rhodobacterales Rhodobacteraceae Rhodobacter Rhodobacter sphaeroides Rhodobacter sphaeroides unclassified 0.52051 | |
| 106 Bacteria Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus cereus thuringiensis Bacillus cereus thuringiensis unclassified 0.15687 | |
| 107 Bacteria Proteobacteria Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa Pseudomonas aeruginosa unclassified 0.14755 | |
| 108 Bacteria Firmicutes Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus agalactiae Streptococcus agalactiae unclassified 0.05124 |