Mercurial > repos > bgruening > augustus
comparison test-data/chr2R.truncated.fa @ 5:b3f5d0879dab draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/augustus commit 0fed5bb024a096dcb5b2858520ba191da7798b6d
author | iuc |
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date | Thu, 23 May 2019 18:17:05 -0400 |
parents | |
children |
comparison
equal
deleted
inserted
replaced
4:4de31938431b | 5:b3f5d0879dab |
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1 >chr2R | |
2 TTGCAATTTGCACTTTTCAATTGCCCCAAAAGATACGCCAACGAAATGCT | |
3 TATTAAAGTATCAAAAACAAATACCAGAAAGCTGTCACCAATCCCGCCCC | |
4 ATAGAAAACATGCCCACTTTGCCGCAGAATTTGCATATTTGTCTCCGTCG | |
5 GCGGTCGTCATTTTAATAAAAAAAAAATGTTTGTATAATTTCAGGTCGTC | |
6 GTGGGATGCGGCGGCTGCTTGCttataaaattaattttaaattaaacaat | |
7 tttaattatGATTCAATAATCAACAAACACACTGCAGCTTCGTCAATGTT | |
8 GTCGCAGACTTTCAACAATGCAAATATTGGTTTACGGCCATAAAGGCCCA | |
9 GCGCGACCAACCAAACCATTAATCCAACTCCGCTCGACTATTGCAAATTG | |
10 TTTAATAGCCGCCTTTCTTTCTTTTATGTTTGCAAAAAGAATGTATTTCC | |
11 ATAATATTGCCGCTTTATGTTTCATCTGGAACCACTTAACTTTGCCTCTG | |
12 CTAATTCAATTAAAAGGAGAATTTAAAAACTTGAATAGCTTGTAAAGTGA | |
13 CAAAAAATTCAGTACTTCTTTTATTGAGTTAGTAACTAATATCAATGCTA | |
14 ATTCAATTCGCAGATGCCCTTGTTTCCACCAAAAATTTAAATTACTACAT | |
15 TGAAAAAAAAAATAATTCTAATAAACTATATTGATTTGCAATAGTATATT | |
16 CCCAATGCTCCATAAACTTGCTTCACATGACttaaaaaataaattaaaat | |
17 ttataGAAAAAACTTGATTTTTGAATTTGTTCCTTGCTTGAAACTTGCTG | |
18 AATTTTTTTATGTGCAGAAATATTTTCGATGGTAATTGAATTAACTCTTA | |
19 ATTTGGTATTTTGCCTGTGTGGTCATAAAATTTAAAGAGCACATTAATTG | |
20 TCTAATTGAAAAAACGGTTTGGCTGCATAAATTGCTCGACGACTTGCTCA | |
21 TTTTTCTCATGATTATTATAGTTATGACAACCATTTGTTTAAGCTAGTTA | |
22 CAGTGCCTCTTGGGAAGACTTACTAAGGGAATGCACCTTTAGTCAAATGC | |
23 AACAGATATTAATTAAATATTCAGTGCTTAATCACTTGCAACAAGTTAAA | |
24 TGTTGATTTTTGCCCAGAGCCCTCTGTGACTTTATTCAATTAGCGTTTGT | |
25 TAACTCCCGTTCCCGAACTTCTCCAGATTTTTTGCCAATCTTTTTCGATG | |
26 CCGGCGGGCACATCATTACATATGCCACGCCCACCTCGCCATTGCCTGCC | |
27 CCAAGCTTTATGCTTGGTGTACGCAAAAATTTATTTACACGCATAATTTA | |
28 AAAAACCTTTTGCGCTTTGCTTAATGGCCATTCATTTATTGTAACACACA | |
29 CACACACTCGCTGGGTGACACTTGCATTATTGAATCTGCCACGCCCACCA | |
30 AAAAGGCGGAGGCACATAATGGGCTGATTTCGTTAGTTGACAGCCACATG | |
31 TTTGCGGTACTCGTTAAGCTGAAAACATGCCTTTTCAAGGGGTTTTGGCA | |
32 TTTATTTTATAATTTAAGTATCTATGCCCATGAAGCTTTTAATATAAAAC | |
33 CACTCAAAACATTTTAAAATACTTTTAAAATATACATTACGTTACATTAA | |
34 ATAATCAAATCAATTGATAGTACGAAACTGACATATAAACAATATTATAG | |
35 GAATGAACACATTTCACACTTACAAAATGTAGAATTTAATTTAAAGGCTA | |
36 TGAAGTATAAACGTATAAAATATATCCAATTATTAAAATATTAAAACAAA | |
37 ATATCAAGTTGAGGCCGCCACCTTTGTTTAAATCTATAAATTGGGAAACA | |
38 GTTTGTTTATTTGTGCTGGACATTAATTGTCTGTTCGAAGAAAGGTAATT | |
39 AAAACAAATCCACATTGTTATCCTGCGCTATCAATATGCCAGCAAATTAA | |
40 TTATGATGTGTTAGACAGATCAATGACATTCTTGCTGAGAGCCGAGTTGC | |
41 TGCAACTCGCTTGCCAAAGTTAAACGCACTCACTTAACTCGCACCATTCA | |
42 GCTTTAGTCACCTGGATTTGATTCGATTTTGTCATCTGCCCGGGCAACAa | |
43 cacatacatatatactacacatgcaaacatatacatatatgcccatatct | |
44 acatGGCCAACTACTTCGATTCCTGGCCTTTTGTACTGGCCCCTTTCGCC | |
45 TGTGGCAATGCTTCCTGTCTGATGTTGCACGAGTAGATGTTGCCgctgtt | |
46 gctgttgctgttgctgttgctTGTGTGCCTTGAGTTGGCAGGCCACGTTC | |
47 TGGTTTCGGTTGCGGTTTCGGTTTGCTGGCTGCGATGGGCGCCTGTTGAC | |
48 GCTTTCGGCTACCCAGACATGGGTATCAGCCAGGTACCGACTTGGCTCTC | |
49 CAGTTTATGGCCGTTTACATGCTCACCGCCCGTTTCTCATATCACTTTAT | |
50 TTGCCAGCGGAATTCGCACGCAACTCCCTCGGTAATGATGCTCAAGAATT | |
51 TTTAATAAAAAACTGCCAGCCAAGCAGGAGGAGCTTTGCTCTTTTATTTT | |
52 TGTGCTGCGACTGATGAAGGCAATTGGAAGGACCTTAATGACAGGCAGCC | |
53 TTTGTGGGTTAAGCAATATATTAATCAGCATATTAATTATGCAGCAAGGT | |
54 AGTTTTGCCCGAGTGCGGGCGGGCATGGCCAGTGTCGAAGGTCAACGAAC | |
55 TGCAGCGGCCGCATGCATTGTTGGGGCATATAAATTGTTTAAACAACTTT | |
56 ACAGACAACATCCGTTGGGCCAGGCAAAATGGCCCGAAGGCGATGGGAAT | |
57 TCGAGTACCAGGCTgccagccagccagccagccagccagccagccagcca | |
58 gtcagccaTGTGACAGGCAGTCGGTCATTATTTCGCACTTTTGTTGCCGC | |
59 TGCGGAAATTTCACAGCAAGAGGCAGCGGCAAACATGCGACACGTGCAAC | |
60 ACCGAAAGTCGAGAGTCTGGGCGATACAGTGTGCCATAACAATAATGCCA | |
61 CAACAAAGATAGAGTCCCTGCCAGTAGAGAGCAGGCTGGGCGAAAAATGT | |
62 GTGCGGGAGTCAGGTGGAAAAGATGCACAAGTCGGTGGCAGACAAAATGG | |
63 AATTTTAATGATATGAGAAGGCGCGCCTTCTGAATATTTTTGCAGGTGAA | |
64 ACTGCTTACCAGCCATCCACTTGGCCACCTCCCCCTCCACCAAACAGCAC | |
65 CAAACTCTTACCCTTTGAACTCGCGTAGTACAACCGGCACTTGAACTACG | |
66 CCGCTTACTACGCTCTTGGCGCTCTTTTCAGTTTGTTTTTGCTGCGTTAT | |
67 AGTGCCCGTTTTTTTTCTGTCCTGACTCAGGCGCAGGCGAGTTGGCCCAG | |
68 AAGAGCGCAAGAGAACCGCTAAGAGCGCATTTACGATTGGCAAGCCGGTA | |
69 AAAATAGAAAAATAAGTAGTTTGAACACAGTTTGTATGAAGGTATGCTGT | |
70 TTCGCTTGAAATTTAATGCAGTTTATATTACAGAAATAGAAAACTAACCA | |
71 ATTACTTTGTTTATTTTGGTATTAAATGAATGAGCTGCACTTACACTTTT | |
72 CAAAATAGTTTATCCAAAGCACTTGACATTTTGGTGGTAGTTATTGCATA | |
73 GTTCAGGTGCTTTTTGTAGTTTAAAACATTTTGAAACCCCTTTTAAGATA | |
74 TCACAAGCACAAAGCACAAAGGCGCACTCACACAATTGCGAACGGCAAGC | |
75 GCCATGTGCGCCTGGCGGTATGCAATAGTTTCTGTTTCTCTTTCGTTTCC | |
76 GTAAATGGTAGTGCGCGTATAGTAgtgtgcgtttgcgtatgcgtgtgtgt | |
77 gtgtgtgtgtgtgtgcgtTTTAGCCGACAAAGTGCAACACACAGCGCAAT | |
78 GACCGACGTACTCGAGCGTTGACTCGTTTCTGCGACAACTTTTCTCGCTC | |
79 CTCGCCGATGGGAATAATGATCTCAGCGTAATGACGATTTTTAGCAGCCA | |
80 GTAAGCTTGTTGATGCTGTGCCGATGACGTTGCGAACTCGCTCTCTCCGG | |
81 GCCGCTCGCTCTCTCTTTCCCACACTCTCTCGGCCATTTTGCGGAAGTTT | |
82 CAACTCACCGCAAAACGCTCCAAAATGAGCAGCCAAATTGCGAGTTCCTT | |
83 CCTTAATTGCGCACTCGTATCGTTCATTTGTATTTGTATTCCCTCCCATC | |
84 AGCATTTTCTCTTCGGCCATATAACAGTTTTCTCTTATACTTTCGCTTCG | |
85 GTTTATAGCACGCACATTCCCGGTGACGTCACAAGGCTTTCCCAACGCTT | |
86 TTTCCATAGAATCAGTTGTTGTTTGGGCTGCACAAGCCGGCAATGTAAAC | |
87 AAAACATAAAATATATGAATGGGTGAGTGAGTTGTGCGGGTGTCTGGGTT | |
88 ATTCGACTGCTTCGGCTGAGTGGGTGGCTGTTTTGGGTGGAAATTGGGTG | |
89 ACCCCGATGCACTGGTGTTGGTGCAAATTCGGCAATGCGTGTGCGCTGCG | |
90 CCTGATGAATGAAAAGTTCGAGTGGCCGCGTGGAAAGCGGGAAAACATCT | |
91 GAGCGTCAGCTGCACGGTCATATGTTTGATATTATTCCTGTGAAAGCGGA | |
92 AAATGATTTTGAATATTAAAGGAAATCGATGCGGAAAATGTTTTGGAGTA | |
93 TTTAATAGCCATTAAATGGATAACGTAGATTTTGTCACAGGTTTATAAAA | |
94 TGTAGTTATAGGTAATATATTCACTAAAACAGAAACTGCCTTACACACTT | |
95 TTAGTATATTGTTTTATTTACTTAAATTACCTAAGTAAATAAAAGTATTT | |
96 TCAAATTGTTACAAAAAGCACACCCTTTTTTCTATTTTTGTTAATATTTG | |
97 AATGCCCCACCAATCGATTGAATTTGAAGCCAATTCGTGATTCGGAAAGC | |
98 GCAGAGTGTCCTGTATTAAATTCAGCCTTGCAGACAAATGCAAAAACCAT | |
99 CGACAGGCCGTGTCAGAAAACACACGAAAATCGAGTGAGCCCCAGAGCAA | |
100 TCGCATTTTAATTTGAATTCTTTCTGGTGAGGCCCTTACAAAAGCCCCCA | |
101 TGCGATGTGCACGACCAAAAAATGAACTTAAGTTTCGGCCAAGAATCTTG | |
102 TTGAAGAATTTCTATTTGAGCATTTGTCATGTCTTCGCCTTAGTCTATAA | |
103 AATATACTGTCGGTGGATGGGGACGCGGGGTGTGTGCAAATATGCGAAAG | |
104 CTAAATGTCAGAGTCAACCCTTTCGCAGGCCATTCTGCCTGCTTTTTTTT | |
105 CAGCCTTTTCTGGCCGGTGTTGCCGCCTTGGCCCCTTTTTTGGGTGGAAA | |
106 GGAAAGTTTTTATCTTAAGCTGCGCGCTGACAGGCAGCAAAGCGGCAAGC | |
107 GAGGCAACACAAGTACAAGCCGGACAAAGAAGCCAGGGGGAGTGGGGATG | |
108 GGCTGGCCGAACGGAAAATGGGAAATGGAAAATGGACGGGCAACGACAAG | |
109 GCGGGCAAACGTCAAGTTATAGAAAATGCTAGTGCCTGCACAATAAGAAA | |
110 AGTGTCATCCGAATTGCTAATCAATGGAATGATGTTGAGGAGACTCAAAA | |
111 GAAATTTAAAGACCTACTAATAAGAAAAAACTGAAAAATCATTAAGTTTT | |
112 TAAACTATTCAAACATATTTAAATAATAATTTGTGCAAATTTATTATTGC | |
113 TTAAAACAACTAAATAAAAATATATAATGTCATTCAAAGTTTCAAAAAAA | |
114 ATTTATTCAATTAAACAAAGGCCATTTTGTATCTTTTCAAAAGTATATGA | |
115 CTTAAAAATAGGTTCATTCATTTTGCTTATGCAAGCTAAGGACTCAGCTT | |
116 TTTGTCAAAGTGCAGAAAAGGGGAATGAAACTGGTCTTAGAGGGAGAAAA | |
117 AATTAAAGGACATGCTGAACGCATTCCTTGGGACACGGGCTGACAGTGAG | |
118 TGATTTGACCATACCCTCATTTGCGTGCAGCAAGGACCAAGATCCGAGCT | |
119 CTGGGTTCCGGGTTCCGGGGTTCCGACTACCGAGATCCAGGCACACCAAT | |
120 GGATTAATGTGCAAGGATGCGACTCGTCAGGCAGGCCAAGAAAATTACGT | |
121 CAAGCTACGCAATGGGCCCGTGCCTTTCCCACTGCCCCCCACCACCCCAc | |
122 aacctaaccaaatccaacccagcccagcacaacccaaaccaTTATCCTTT | |
123 TGGAAATCTGATGATGAGCGCCGACTGCTGCGGGCGGGCGACTCAAAATG | |
124 GGAGTGACTCATTTACGCGCTGCACTCGAGTTTCAACCGGCAGCCGGCGA | |
125 AGGAAAAGCGGGACTCCGAGAACTTTTCCAAGCTATTTCTGCGCCCAAAT | |
126 GACAGCGAAATGTAATAATGAAAAACTTTTTCTTTGTCAACTTGATGAGT | |
127 ATGAAATTTTTCACaaaaaaaaaaaaagaaaaaagattaaataaaataaa | |
128 agaCGAGCGGCAAAGGAACGGGTTGAGCTTGGGTGGCAGGGCGGTGAGCT | |
129 AGAAATATGAAACGTCAGGACTGGTCCTTAGTCTTAGGTTGGCCTTAGTC | |
130 TTGGTTGGCCTTCGAGATTAGTTATGGCAAAGGAATTTCCAAGCGAAGGC | |
131 GCACGCAAATGATTGCATGCCGCATTACGCATACGCCCGGTTGTGCGTGG | |
132 CCGGTTTTAAAATTGAATTTTAATATACAGCAGACACAAAGAGATGTACA | |
133 TGACCATATGTATATGTATATAGCTGATCCCTGGCCATGGCTGCTATAAG | |
134 CCAGGTTATCCAGCCACCCCGAAAAAACACATGTTCTGCATTTTTACTTT | |
135 GTACTGGACCAGGACCCACGGTCCATCATCCCTACCATTTTGCTGCTGCA | |
136 CCGCATCGGGGATTGCGGAATTCATAAGCTATGTGCGTTTGCTACAAAAG | |
137 TGGAATTTTCGCCACGCCAAAGGATACCCGCTTGCAGGCTCCCAGCTCAC | |
138 AGTTCCCACTTCCCGTTTCCTAGATCCTGAGCATGCCATTAACCCACTCG | |
139 CAAAAAGCGCAAAATCGCTTAAATTATTGTTACAAGCTGCCAGTGCCAAG | |
140 TGGCAGGCACAGCAACAGCAAAAACAAGAACAAGACCAGGGGggcaggtg | |
141 gcaggtggcaggtggcaCAGGGCAAACCACCTGAGCTTTTGGCCGCGCTT | |
142 TGCTTTGAGTGCCAGTTAGCATAACTCCGCAGGCCGCAGGCGAATATGTc | |
143 tgttgttgctgcttttgccgctttgctactctcctgatgttgggtgctgc | |
144 tcctgattttgctgttgccgttAGAAGTATTTGTGGCGCGGCAAAGGACA | |
145 TCCTCTCGGCAGCCCGTTCTCACCTGCCTGCCAAGCTGCAAGCTCCAGCT | |
146 GAAAGTGTCTTTGGTGAGCGCTACCCACCACCTAAATATACAAAGTGTGG | |
147 GGGAAAAACAAGAAAAATAACAACCTACAATAGTCTCTTCTTTGTTACCT | |
148 AAAAATATAAGAAAAGCACACCTCGCAATTGTGTTGAAAAAAACAAATTG | |
149 ATACGAAAAAAAGCGATAGGGATGCCACAACAAAGCGCAATCTTATCAAA | |
150 CGTATTAAACATTTTGCTTATCAAAACAGCGAGGTTTGCACAACAATGCG | |
151 AAATAGGAGGAGGCAAAATTCTTATCTGCATTTCATCAGTCAAACATTTA | |
152 CTGTAATCAAAAATCGCAACTATAAGGAACACAAGTAAAGGCCACAAATG | |
153 AGAAGCAAATTATTGTTCGATATCCGTGAATTTGAAGGGGAACGTAATGG | |
154 CCGGTTCCATGACGAACATGGTCTTGAATGGACGGCTGGCATCCCGATTG | |
155 AACTCCACATGGAAATTGCGAATCAACTTGGCCACTGTGGTCTCCATTTC | |
156 CAGATCCACCACCCGTTTGCCAATGCACATGCGGGGTCCAAAGCCAAAGG | |
157 GAAGGAACGTGAAGGGGCTGACCTGCATCTTCTTTCCGGTCTCCGGATCC | |
158 CTTAACCAGCGCTCCGGCAGAAATTCATCTGGTCGTGGATAATATGTAGC | |
159 TTCCTTCATCAGCACATTTGAGCCGAGCAGGACAGTCGTTCCCTTGGGCA | |
160 CCCGGTAACCCGAAAGTATCACATCATTTTGGCAGGTTCTCATGGTTCCC | |
161 AAGCCATTGGGATAGTATCGCAGTGTCTCCTTGATCACAGCCCTCAAATA | |
162 TGGCATATCCTTCATGTTCTCCTCGTTGAGTAGGGAATCCTTTGTGGGCA | |
163 TGATGCTCAAGAGCTCCTCCCGCAGTTTGGCCTGCTTATCCGGATGCTTT | |
164 GAGAGGCAGAGTAAAACAGCCGACAGAAGCGTGGCTGTGGCATCCACACC | |
165 AGCGAATAGGATGTCCAGACTCATAATCACCGCCACCTTGGGATCGATCT | |
166 CCATTAATCTCTCCAGCATACTGTTACTATTTATTTTTTCGCCAGCCTGG | |
167 CGGCGCTTTTCCAGTGCATCCTGATTTTCCTTCAGCATTTTCTGGGCCAC | |
168 ATTCAAACTGTCATTGAGAGTTCGCTTCATTTTCCTGTAGGTGGGCGTCG | |
169 ATATGATCTTCCACATGGAGGGCTGAATGTCTAGCTTAAATGTGAGACGG | |
170 AAAATATCCCTCGAGGTCTGGAAGAGGGTCAATGCATCGGAATTATCGCG | |
171 GTTTTTTCTAATCAGACCCATTTGCCGATCGAAAGCCACCAGGCCGAGTG | |
172 ACTCGAAAACAAGCCGGCTTATTTCATCCGTAAAATCTTCGGGGACTTCT | |
173 AGAGTTTTTGGATCGCGGATTTCCTTAATGCTGCACAGTAAAATGGAATT | |
174 TATTGCTATATATAAATAACAATTCAATAACAAAAATTTCTTACCGCTCT | |
175 ATAAACTCATTATTGATATTAGACAATGGTTCATAATACATTCTCAAGCC | |
176 CCTGGGTTGCATAAAGATGGGATTAATGGCTGATCGTAGTTTTCCCCATG | |
177 CCTCATTTTGTCTGAAATATTCAAATTCAATTGTTTCCTTGCTACTTATT | |
178 AGATTTTATACTCACGAAGCCACCAATCCTTGAACCTCACCGTAAACATC | |
179 TGGTCGAACGTGTTCGCGGAAATATACAATGGAATCCAGGCCATCACGAC | |
180 GTGGCCAGATACCCTCGTTGCGGAATACCATCTCAATGTCCTTTGTGTTG | |
181 AAAGTGGTGACCCAATCCTTGCGGCCAAACATTCCGGGCATTACATAGAT | |
182 ATCTCCATAGCGCTTTCGCATGGCACTGGTGTATTCCGTAATCGATGCAT | |
183 TTTGGAATTCACCACCGGGCATGAAAGCCCTCATAAATTTGAATTTGTTG | |
184 GGCCGCGGAATCTCATCGTAGGTCTTGTGCTCCTCCGTTATCTATAATTG | |
185 GAAACTAATAACATGATAAATCTATTTCGACTGGATTTTGTGCATACTAA | |
186 CACTAGATTTAGCTTGTTCATGTGCCAAAACGGAGGCTGATCTTGAAGAT | |
187 CGAACGGGACCCACGTAAATCGCCACAGATCGCGCACTGCTCAATGTATT | |
188 CATTCTATTCCTTTTGGTGATCAACTGCAACTAAAAACAGTTCCACTTTC | |
189 GAGAACGTTCTTATACCAAAGGCTTATCTCTAAAACGTAGAAAAGAGAGG | |
190 AGAGCGAATAACTTGAAATGCTTCAAAATGCAAAAATCTCAAACAAAAAC | |
191 AAAAGCCAGCAAACAAAGCATGAGTTTCATTTTCTTATCAGCTGAACGGT | |
192 ATAATCGCCGTGAATTGCCTACCTCACTCAACTGAAAAAATAAACAAATG | |
193 AACGTGACTGGCTAGAAAAACAAATTGAGAGCGTTGGAACTTACAATAAA | |
194 TACACCTCAGAGAATTTGATACTACTATTACGACTATTACATACCCGTTA | |
195 CTCATTTAGTGGGATCGCTAGaaaaaaatctaaaatatttaaatattttt | |
196 taaaaatttataaGGATTCTAGTTCAACGGTAGACAATTTCAAGATAAAT | |
197 AACCAAATTAAAGAAAAATAAAAACAATTCTTAGAGTTGATCCTTGTTCT | |
198 CTTTGCATACTGatattttatttattttttattttatttatttaCTGGCG | |
199 CCGCTTTTCCACAGAGTCCTCGGTGTCCTTTATCATTTTCTGTGAGAACA | |
200 TTAAGATGTCATCGAGAAGACGCATCATCATCCGAAAGTTTGGAGTGGAG |