Mercurial > repos > bgruening > augustus_training

comparison augustus_training.xml @ 3:ccf8d0bbebe9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/augustus commit c659b84bf74f5abb260ee49ce76b61e5d5fa29c1
author iuc
date Thu, 30 May 2019 06:58:53 -0400
parents 0d425a4b6896
children 6519ebe25019
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2:0d425a4b6896 3:ccf8d0bbebe9
6 </macros> 6 </macros>
7 <expand macro="requirements"> 7 <expand macro="requirements">
8 <requirement type="package" version="2.31.10">maker</requirement> 8 <requirement type="package" version="2.31.10">maker</requirement>
9 </expand> 9 </expand>
10 <command><![CDATA[ 10 <command><![CDATA[
11 cp -r "\$AUGUSTUS_CONFIG_PATH" augustus_dir/ && 11 cp -r `which augustus | xargs dirname`/../config/ augustus_dir/ &&
12 12
13 export AUGUSTUS_CONFIG_PATH=`pwd`/augustus_dir/ && 13 export AUGUSTUS_CONFIG_PATH=`pwd`/augustus_dir/ &&
14 14
15 maker2zff '${maker_gff}' && 15 maker2zff '${maker_gff}' &&
16 16