Mercurial > repos > bgruening > augustus_training
comparison augustus_training.xml @ 3:ccf8d0bbebe9 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/augustus commit c659b84bf74f5abb260ee49ce76b61e5d5fa29c1
author | iuc |
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date | Thu, 30 May 2019 06:58:53 -0400 |
parents | 0d425a4b6896 |
children | 6519ebe25019 |
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2:0d425a4b6896 | 3:ccf8d0bbebe9 |
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6 </macros> | 6 </macros> |
7 <expand macro="requirements"> | 7 <expand macro="requirements"> |
8 <requirement type="package" version="2.31.10">maker</requirement> | 8 <requirement type="package" version="2.31.10">maker</requirement> |
9 </expand> | 9 </expand> |
10 <command><![CDATA[ | 10 <command><![CDATA[ |
11 cp -r "\$AUGUSTUS_CONFIG_PATH" augustus_dir/ && | 11 cp -r `which augustus | xargs dirname`/../config/ augustus_dir/ && |
12 | 12 |
13 export AUGUSTUS_CONFIG_PATH=`pwd`/augustus_dir/ && | 13 export AUGUSTUS_CONFIG_PATH=`pwd`/augustus_dir/ && |
14 | 14 |
15 maker2zff '${maker_gff}' && | 15 maker2zff '${maker_gff}' && |
16 | 16 |