Mercurial > repos > bgruening > bionano_scaffold
annotate macros.xml @ 4:8cc3862f8b8e draft
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit a3d75aba3a21d88adb3706fbcefcaed4fbcb80fe"
author | bgruening |
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date | Tue, 25 May 2021 20:12:52 +0000 |
parents | 9bd94d9a1b2e |
children | 96cacb31d571 |
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fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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1 <macros> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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2 <token name="@TOOL_VERSION@">3.6.1</token> |
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8cc3862f8b8e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit a3d75aba3a21d88adb3706fbcefcaed4fbcb80fe"
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3 <token name="@GALAXY_TOOL_VERSION@">galaxy1</token> |
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9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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4 <token name="@BIONANO_SUPPORT_TEXT@"> |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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5 Bionano Genomics has agreed to provide the licensed Bionano Solve |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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6 software to enable the VGP to package the software in a container. |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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7 Bionanno Solve as shipped in this container may not be the latest and |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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8 may not run efficiently on non-validated hardware. Hence, it is not |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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9 supported by Bionano Genomics. Any questions concerning this version |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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10 should be passed to the VGP (https://github.com/VGP/vgp-assembly/issues) |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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11 or Galaxy community (https://help.galaxyproject.org). |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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12 For the latest supported Bionano software, visit Bionano Support |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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13 https://bionanogenomics.com/support/ |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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14 </token> |
9bd94d9a1b2e
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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15 |
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"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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16 <xml name="edam_ontology"> |
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"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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17 <edam_topics> |
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"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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18 <edam_topic>topic_0196</edam_topic> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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19 </edam_topics> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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20 <edam_operations> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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21 <edam_operation>operation_0525</edam_operation> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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22 </edam_operations> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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23 </xml> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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24 <xml name="requirements"> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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25 <requirements> |
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"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit a3d75aba3a21d88adb3706fbcefcaed4fbcb80fe"
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26 <container type="docker">quay.io/galaxy/bionano-docker-scaffold:1.6.01-bio</container> |
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"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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27 </requirements> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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28 </xml> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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29 <macro name="sanitize_string" > |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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30 <sanitizer invalid_char=""> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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31 <valid initial="string.letters,string.digits"> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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32 </valid> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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33 </sanitizer> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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34 </macro> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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35 <xml name="citations"> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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36 <citations> |
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"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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37 <citation type="doi">10.1186/s12864-015-1911-8</citation> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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38 </citations> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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39 </xml> |
fec6a0b53189
"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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40 </macros> |