Mercurial > repos > bgruening > bionano_scaffold

annotate macros.xml @ 7:a7f16f24e9a1 draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/bionano commit bcbd45152c1809e656b2d09187847608a606d02c"
author bgruening
date Mon, 17 Jan 2022 08:15:31 +0000
parents 5d7c5ae1b69b
children 5258e18bbe23
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fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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1 <macros>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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2 <token name="@TOOL_VERSION@">3.6.1</token>
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5d7c5ae1b69b "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/bionano commit f69dd59785c9674ebd58506d5d8b31289d7e9532"
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3 <token name="@VERSION_SUFFIX@">3</token>
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9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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4 <token name="@BIONANO_SUPPORT_TEXT@">
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5 Bionano Genomics has agreed to provide the licensed Bionano Solve
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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6 software to enable the VGP to package the software in a container.
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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7 Bionanno Solve as shipped in this container may not be the latest and
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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8 may not run efficiently on non-validated hardware. Hence, it is not
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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9 supported by Bionano Genomics. Any questions concerning this version
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10 should be passed to the VGP (https://github.com/VGP/vgp-assembly/issues)
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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11 or Galaxy community (https://help.galaxyproject.org).
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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12 For the latest supported Bionano software, visit Bionano Support
9bd94d9a1b2e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 70c17a8d4b839becfda3e41fccc6bb6a8d3a6eb0-dirty"
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13 https://bionanogenomics.com/support/
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14 </token>
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15
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16 <xml name="edam_ontology">
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17 <edam_topics>
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18 <edam_topic>topic_0196</edam_topic>
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19 </edam_topics>
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20 <edam_operations>
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21 <edam_operation>operation_0525</edam_operation>
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22 </edam_operations>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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23 </xml>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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24 <xml name="requirements">
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25 <requirements>
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8cc3862f8b8e "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit a3d75aba3a21d88adb3706fbcefcaed4fbcb80fe"
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26 <container type="docker">quay.io/galaxy/bionano-docker-scaffold:1.6.01-bio</container>
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27 </requirements>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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28 </xml>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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29 <macro name="sanitize_string" >
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30 <sanitizer invalid_char="">
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31 <valid initial="string.letters,string.digits">
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32 </valid>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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33 </sanitizer>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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34 </macro>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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35 <xml name="citations">
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36 <citations>
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37 <citation type="doi">10.1186/s12864-015-1911-8</citation>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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38 </citations>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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39 </xml>
fec6a0b53189 "planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
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40 </macros>