Mercurial > repos > bgruening > bionano_scaffold

comparison test-data/test_05_report.txt @ 4:8cc3862f8b8e draft

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"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit a3d75aba3a21d88adb3706fbcefcaed4fbcb80fe"
author bgruening
date Tue, 25 May 2021 20:12:52 +0000
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3:295c0e28f4ee 4:8cc3862f8b8e
1 Original BioNano Genome Map statistics:
2 Count = 2
3 Min length (Mbp) = 0.720
4 Median length (Mbp) = 2.313
5 Mean length (Mbp) = 2.313
6 N50 length (Mbp) = 3.906
7 Max length (Mbp) = 3.906
8 Total length (Mbp) = 4.625
9
10 Original NGS sequences statistics:
11 Count = 1
12 Min length (Mbp) = 4.753
13 Median length (Mbp) = 4.753
14 Mean length (Mbp) = 4.753
15 N50 length (Mbp) = 4.753
16 Max length (Mbp) = 4.753
17 Total length (Mbp) = 4.753
18
19 NGS FASTA sequence in hybrid scaffold statistics:
20 Count = 1
21 Min length (Mbp) = 4.753
22 Median length (Mbp) = 4.753
23 Mean length (Mbp) = 4.753
24 N50 length (Mbp) = 4.753
25 Max length (Mbp) = 4.753
26 Total length (Mbp) = 4.753
27
28 Hybrid scaffold FASTA statistics:
29 Count = 1
30 Min length (Mbp) = 4.753
31 Median length (Mbp) = 4.753
32 Mean length (Mbp) = 4.753
33 N50 length (Mbp) = 4.753
34 Max length (Mbp) = 4.753
35 Total length (Mbp) = 4.753
36
37 Hybrid scaffold FASTA plus not scaffolded NGS FASTA statistics:
38 Count = 1
39 Min length (Mbp) = 4.753
40 Median length (Mbp) = 4.753
41 Mean length (Mbp) = 4.753
42 N50 length (Mbp) = 4.753
43 Max length (Mbp) = 4.753
44 Total length (Mbp) = 4.753
45