Mercurial > repos > bgruening > bionano_scaffold

diff test-data/test_03_report.txt @ 0:fec6a0b53189 draft

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"planemo upload for repository https://bionanogenomics.com/support/software-downloads/ commit 1d3a1a449c7398c8fad07663224738265f77c0be"
author bgruening
date Mon, 17 May 2021 15:07:05 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_03_report.txt	Mon May 17 15:07:05 2021 +0000
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+Original BioNano Genome Map statistics:
+Count  = 2
+Min length (Mbp) = 0.720
+Median length (Mbp) = 2.313
+Mean length (Mbp) = 2.313
+N50 length (Mbp) = 3.906
+Max length (Mbp) = 3.906
+Total length (Mbp) = 4.625
+
+Original NGS sequences statistics:
+Count  = 1
+Min length (Mbp) = 4.753
+Median length (Mbp) = 4.753
+Mean length (Mbp) = 4.753
+N50 length (Mbp) = 4.753
+Max length (Mbp) = 4.753
+Total length (Mbp) = 4.753
+
+NGS FASTA sequence in hybrid scaffold statistics:
+Count  = 1
+Min length (Mbp) = 4.753
+Median length (Mbp) = 4.753
+Mean length (Mbp) = 4.753
+N50 length (Mbp) = 4.753
+Max length (Mbp) = 4.753
+Total length (Mbp) = 4.753
+
+Hybrid scaffold FASTA statistics:
+Count  = 1
+Min length (Mbp) = 4.753
+Median length (Mbp) = 4.753
+Mean length (Mbp) = 4.753
+N50 length (Mbp) = 4.753
+Max length (Mbp) = 4.753
+Total length (Mbp) = 4.753
+
+Hybrid scaffold FASTA plus not scaffolded NGS FASTA statistics:
+Count  = 1
+Min length (Mbp) = 4.753
+Median length (Mbp) = 4.753
+Mean length (Mbp) = 4.753
+N50 length (Mbp) = 4.753
+Max length (Mbp) = 4.753
+Total length (Mbp) = 4.753
+