Mercurial > repos > bgruening > bismark

comparison bismark_wrapper.py @ 2:82814a8a2395 draft

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added samtools 0.1.19 as dependency
author bgruening
date Wed, 21 Aug 2013 05:19:54 -0400
parents 62c6da72dd4a
children 91f07ff056ca
comparison
equal deleted inserted replaced
1:9d02cd7883ad 2:82814a8a2395
283 break 283 break
284 except OverflowError: 284 except OverflowError:
285 pass 285 pass
286 286
287 raise Exception, stderr 287 raise Exception, stderr
288
289 tmp_stdout.close() 288 tmp_stdout.close()
290 tmp_stderr.close() 289 tmp_stderr.close()
291 290
292 # TODO: look for errors in program output. 291 # TODO: look for errors in program output.
293 except Exception, e: 292 except Exception, e: