Mercurial > repos > bgruening > bismark

comparison test-data/output_mbias_report.txt @ 8:9bfe38410155 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/bismark commit 51299fa62f0566a4a897b1c149db564631282fff
author bgruening
date Wed, 22 Aug 2018 08:09:42 -0400
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comparison
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7:fcadce4d9a06 8:9bfe38410155
1 CpG context
2 ===========
3 position count methylated count unmethylated % methylation coverage
4 1 9 3 75.00 12
5 2 4 1 80.00 5
6 3 7 2 77.78 9
7 4 5 2 71.43 7
8 5 3 1 75.00 4
9 6 2 2 50.00 4
10 7 5 4 55.56 9
11 8 7 1 87.50 8
12 9 3 2 60.00 5
13 10 2 0 100.00 2
14 11 4 1 80.00 5
15 12 4 2 66.67 6
16 13 1 1 50.00 2
17 14 4 0 100.00 4
18 15 3 1 75.00 4
19 16 2 1 66.67 3
20 17 3 2 60.00 5
21 18 5 3 62.50 8
22 19 4 1 80.00 5
23 20 2 1 66.67 3
24 21 1 3 25.00 4
25 22 1 2 33.33 3
26 23 1 1 50.00 2
27 24 5 0 100.00 5
28 25 3 0 100.00 3
29 26 4 2 66.67 6
30 27 3 2 60.00 5
31 28 2 1 66.67 3
32 29 6 2 75.00 8
33 30 3 1 75.00 4
34 31 1 0 100.00 1
35 32 3 1 75.00 4
36 33 4 2 66.67 6
37 34 3 1 75.00 4
38 35 2 1 66.67 3
39 36 2 3 40.00 5
40 37 7 4 63.64 11
41 38 4 1 80.00 5
42 39 4 1 80.00 5
43 40 4 5 44.44 9
44 41 5 4 55.56 9
45 42 5 2 71.43 7
46 43 1 3 25.00 4
47 44 0 1 0.00 1
48 45 4 1 80.00 5
49 46 5 0 100.00 5
50 47 3 2 60.00 5
51 48 1 1 50.00 2
52 49 2 2 50.00 4
53 50 3 2 60.00 5
54 51 2 4 33.33 6
55 52 1 0 100.00 1
56 53 2 1 66.67 3
57 54 1 0 100.00 1
58 55 3 0 100.00 3
59 56 1 1 50.00 2
60 57 2 0 100.00 2
61 58 0 1 0.00 1
62 59 4 3 57.14 7
63 60 4 4 50.00 8
64 61 0 1 0.00 1
65 62 4 6 40.00 10
66 63 4 0 100.00 4
67 64 2 1 66.67 3
68 65 0 0 0
69 66 3 1 75.00 4
70 67 2 0 100.00 2
71 68 2 1 66.67 3
72 69 4 0 100.00 4
73 70 3 2 60.00 5
74 71 3 2 60.00 5
75 72 3 1 75.00 4
76 73 3 0 100.00 3
77 74 7 4 63.64 11
78 75 3 1 75.00 4
79 76 1 0 100.00 1
80 77 1 3 25.00 4
81 78 0 1 0.00 1
82 79 0 3 0.00 3
83 80 1 3 25.00 4
84 81 1 1 50.00 2
85 82 0 2 0.00 2
86 83 3 2 60.00 5
87 84 3 1 75.00 4
88 85 1 1 50.00 2
89
90 CHG context
91 ===========
92 position count methylated count unmethylated % methylation coverage
93 1 10 21 32.26 31
94 2 11 24 31.43 35
95 3 5 20 20.00 25
96 4 2 10 16.67 12
97 5 1 13 7.14 14
98 6 0 17 0.00 17
99 7 0 27 0.00 27
100 8 0 22 0.00 22
101 9 0 22 0.00 22
102 10 0 26 0.00 26
103 11 0 22 0.00 22
104 12 1 13 7.14 14
105 13 0 14 0.00 14
106 14 1 23 4.17 24
107 15 0 30 0.00 30
108 16 0 17 0.00 17
109 17 0 24 0.00 24
110 18 0 23 0.00 23
111 19 0 14 0.00 14
112 20 0 26 0.00 26
113 21 0 23 0.00 23
114 22 0 25 0.00 25
115 23 0 22 0.00 22
116 24 0 18 0.00 18
117 25 0 20 0.00 20
118 26 0 17 0.00 17
119 27 2 24 7.69 26
120 28 0 22 0.00 22
121 29 0 24 0.00 24
122 30 0 21 0.00 21
123 31 0 21 0.00 21
124 32 0 22 0.00 22
125 33 0 25 0.00 25
126 34 0 15 0.00 15
127 35 1 29 3.33 30
128 36 1 24 4.00 25
129 37 0 30 0.00 30
130 38 0 16 0.00 16
131 39 0 27 0.00 27
132 40 1 19 5.00 20
133 41 2 22 8.33 24
134 42 0 20 0.00 20
135 43 0 20 0.00 20
136 44 1 22 4.35 23
137 45 0 25 0.00 25
138 46 1 21 4.55 22
139 47 1 32 3.03 33
140 48 1 16 5.88 17
141 49 2 26 7.14 28
142 50 0 19 0.00 19
143 51 0 18 0.00 18
144 52 0 20 0.00 20
145 53 1 34 2.86 35
146 54 0 27 0.00 27
147 55 0 24 0.00 24
148 56 0 14 0.00 14
149 57 0 19 0.00 19
150 58 0 19 0.00 19
151 59 0 21 0.00 21
152 60 0 20 0.00 20
153 61 0 25 0.00 25
154 62 0 25 0.00 25
155 63 0 29 0.00 29
156 64 0 21 0.00 21
157 65 0 26 0.00 26
158 66 0 19 0.00 19
159 67 0 20 0.00 20
160 68 0 7 0.00 7
161 69 1 15 6.25 16
162 70 1 19 5.00 20
163 71 1 17 5.56 18
164 72 0 10 0.00 10
165 73 0 22 0.00 22
166 74 0 25 0.00 25
167 75 0 14 0.00 14
168 76 0 24 0.00 24
169 77 0 18 0.00 18
170 78 1 14 6.67 15
171 79 0 16 0.00 16
172 80 0 17 0.00 17
173 81 0 12 0.00 12
174 82 0 17 0.00 17
175 83 1 17 5.56 18
176 84 0 25 0.00 25
177 85 1 17 5.56 18
178
179 CHH context
180 ===========
181 position count methylated count unmethylated % methylation coverage
182 1 18 31 36.73 49
183 2 5 25 16.67 30
184 3 4 31 11.43 35
185 4 3 28 9.68 31
186 5 5 36 12.20 41
187 6 3 43 6.52 46
188 7 2 52 3.70 54
189 8 1 62 1.59 63
190 9 2 52 3.70 54
191 10 1 57 1.72 58
192 11 1 59 1.67 60
193 12 0 70 0.00 70
194 13 4 55 6.78 59
195 14 0 68 0.00 68
196 15 1 65 1.52 66
197 16 1 74 1.33 75
198 17 1 81 1.22 82
199 18 1 71 1.39 72
200 19 1 72 1.37 73
201 20 1 78 1.27 79
202 21 0 82 0.00 82
203 22 1 69 1.43 70
204 23 0 85 0.00 85
205 24 1 94 1.05 95
206 25 1 78 1.27 79
207 26 1 89 1.11 90
208 27 0 72 0.00 72
209 28 0 84 0.00 84
210 29 0 72 0.00 72
211 30 1 61 1.61 62
212 31 0 79 0.00 79
213 32 0 88 0.00 88
214 33 3 80 3.61 83
215 34 1 85 1.16 86
216 35 0 79 0.00 79
217 36 2 68 2.86 70
218 37 1 62 1.59 63
219 38 0 77 0.00 77
220 39 1 87 1.14 88
221 40 1 77 1.28 78
222 41 0 70 0.00 70
223 42 2 69 2.82 71
224 43 0 66 0.00 66
225 44 2 76 2.56 78
226 45 3 85 3.41 88
227 46 2 69 2.82 71
228 47 0 68 0.00 68
229 48 0 81 0.00 81
230 49 0 73 0.00 73
231 50 0 79 0.00 79
232 51 0 81 0.00 81
233 52 1 65 1.52 66
234 53 0 79 0.00 79
235 54 3 90 3.23 93
236 55 1 80 1.23 81
237 56 1 82 1.20 83
238 57 1 77 1.28 78
239 58 0 71 0.00 71
240 59 1 84 1.18 85
241 60 1 95 1.04 96
242 61 1 84 1.18 85
243 62 0 95 0.00 95
244 63 1 88 1.12 89
245 64 0 89 0.00 89
246 65 1 77 1.28 78
247 66 3 89 3.26 92
248 67 1 69 1.43 70
249 68 2 98 2.00 100
250 69 2 92 2.13 94
251 70 0 94 0.00 94
252 71 1 87 1.14 88
253 72 1 83 1.19 84
254 73 0 87 0.00 87
255 74 2 74 2.63 76
256 75 1 78 1.27 79
257 76 0 74 0.00 74
258 77 3 79 3.66 82
259 78 1 71 1.39 72
260 79 0 66 0.00 66
261 80 0 71 0.00 71
262 81 1 84 1.18 85
263 82 0 88 0.00 88
264 83 2 79 2.47 81
265 84 2 81 2.41 83
266 85 2 63 3.08 65
267