Mercurial > repos > bgruening > bismark

diff tool_data_table_conf.xml.sample @ 7:fcadce4d9a06 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/bismark commit b'e6ee273f75fff61d1e419283fa8088528cf59470\n'
author bgruening
date Sat, 06 May 2017 13:18:09 -0400
parents 62c6da72dd4a
children
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--- a/tool_data_table_conf.xml.sample	Wed Feb 11 16:21:51 2015 -0500
+++ b/tool_data_table_conf.xml.sample	Sat May 06 13:18:09 2017 -0400
@@ -1,13 +1,13 @@
 <!-- Use the file tool_data_table_conf.xml.oldlocstyle if you don't want to update your loc files as changed in revision 4550:535d276c92bc-->
 <tables>
-    <!-- Locations of indexes in the Bowtie mapper format -->
-    <table name="bowtie_indexes" comment_char="#">
-        <columns>value, dbkey, name, path</columns>
-        <file path="tool-data/bowtie_indices.loc" />
+    <!-- Location of all bismark indexes -->
+     <table name="bismark_indexes" comment_char="#" allow_duplicate_entries="False">
+        <columns>species, version, release, value, dbkey, name, path</columns>
+        <file path="tool-data/bismark_indexes.loc" />
     </table>
-    <!-- Locations of indexes in the Bowtie2 mapper format -->
-    <table name="bowtie2_indexes" comment_char="#">
+    <!-- Locations of all fasta files under genome directory -->
+    <table name="all_fasta" comment_char="#" allow_duplicate_entries="False">
         <columns>value, dbkey, name, path</columns>
-        <file path="tool-data/bowtie2_indices.loc" />
+        <file path="tool-data/all_fasta.loc" />
     </table>
 </tables>