Mercurial > repos > bgruening > bismark
view test-data/output_mbias_report.txt @ 16:a4504327c890 draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/bismark commit ce4520063ab4d016dd5c5680c0f03eae849b150c"
author | bgruening |
---|---|
date | Wed, 21 Aug 2019 12:59:48 -0400 |
parents | 9bfe38410155 |
children |
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CpG context =========== position count methylated count unmethylated % methylation coverage 1 9 3 75.00 12 2 4 1 80.00 5 3 7 2 77.78 9 4 5 2 71.43 7 5 3 1 75.00 4 6 2 2 50.00 4 7 5 4 55.56 9 8 7 1 87.50 8 9 3 2 60.00 5 10 2 0 100.00 2 11 4 1 80.00 5 12 4 2 66.67 6 13 1 1 50.00 2 14 4 0 100.00 4 15 3 1 75.00 4 16 2 1 66.67 3 17 3 2 60.00 5 18 5 3 62.50 8 19 4 1 80.00 5 20 2 1 66.67 3 21 1 3 25.00 4 22 1 2 33.33 3 23 1 1 50.00 2 24 5 0 100.00 5 25 3 0 100.00 3 26 4 2 66.67 6 27 3 2 60.00 5 28 2 1 66.67 3 29 6 2 75.00 8 30 3 1 75.00 4 31 1 0 100.00 1 32 3 1 75.00 4 33 4 2 66.67 6 34 3 1 75.00 4 35 2 1 66.67 3 36 2 3 40.00 5 37 7 4 63.64 11 38 4 1 80.00 5 39 4 1 80.00 5 40 4 5 44.44 9 41 5 4 55.56 9 42 5 2 71.43 7 43 1 3 25.00 4 44 0 1 0.00 1 45 4 1 80.00 5 46 5 0 100.00 5 47 3 2 60.00 5 48 1 1 50.00 2 49 2 2 50.00 4 50 3 2 60.00 5 51 2 4 33.33 6 52 1 0 100.00 1 53 2 1 66.67 3 54 1 0 100.00 1 55 3 0 100.00 3 56 1 1 50.00 2 57 2 0 100.00 2 58 0 1 0.00 1 59 4 3 57.14 7 60 4 4 50.00 8 61 0 1 0.00 1 62 4 6 40.00 10 63 4 0 100.00 4 64 2 1 66.67 3 65 0 0 0 66 3 1 75.00 4 67 2 0 100.00 2 68 2 1 66.67 3 69 4 0 100.00 4 70 3 2 60.00 5 71 3 2 60.00 5 72 3 1 75.00 4 73 3 0 100.00 3 74 7 4 63.64 11 75 3 1 75.00 4 76 1 0 100.00 1 77 1 3 25.00 4 78 0 1 0.00 1 79 0 3 0.00 3 80 1 3 25.00 4 81 1 1 50.00 2 82 0 2 0.00 2 83 3 2 60.00 5 84 3 1 75.00 4 85 1 1 50.00 2 CHG context =========== position count methylated count unmethylated % methylation coverage 1 10 21 32.26 31 2 11 24 31.43 35 3 5 20 20.00 25 4 2 10 16.67 12 5 1 13 7.14 14 6 0 17 0.00 17 7 0 27 0.00 27 8 0 22 0.00 22 9 0 22 0.00 22 10 0 26 0.00 26 11 0 22 0.00 22 12 1 13 7.14 14 13 0 14 0.00 14 14 1 23 4.17 24 15 0 30 0.00 30 16 0 17 0.00 17 17 0 24 0.00 24 18 0 23 0.00 23 19 0 14 0.00 14 20 0 26 0.00 26 21 0 23 0.00 23 22 0 25 0.00 25 23 0 22 0.00 22 24 0 18 0.00 18 25 0 20 0.00 20 26 0 17 0.00 17 27 2 24 7.69 26 28 0 22 0.00 22 29 0 24 0.00 24 30 0 21 0.00 21 31 0 21 0.00 21 32 0 22 0.00 22 33 0 25 0.00 25 34 0 15 0.00 15 35 1 29 3.33 30 36 1 24 4.00 25 37 0 30 0.00 30 38 0 16 0.00 16 39 0 27 0.00 27 40 1 19 5.00 20 41 2 22 8.33 24 42 0 20 0.00 20 43 0 20 0.00 20 44 1 22 4.35 23 45 0 25 0.00 25 46 1 21 4.55 22 47 1 32 3.03 33 48 1 16 5.88 17 49 2 26 7.14 28 50 0 19 0.00 19 51 0 18 0.00 18 52 0 20 0.00 20 53 1 34 2.86 35 54 0 27 0.00 27 55 0 24 0.00 24 56 0 14 0.00 14 57 0 19 0.00 19 58 0 19 0.00 19 59 0 21 0.00 21 60 0 20 0.00 20 61 0 25 0.00 25 62 0 25 0.00 25 63 0 29 0.00 29 64 0 21 0.00 21 65 0 26 0.00 26 66 0 19 0.00 19 67 0 20 0.00 20 68 0 7 0.00 7 69 1 15 6.25 16 70 1 19 5.00 20 71 1 17 5.56 18 72 0 10 0.00 10 73 0 22 0.00 22 74 0 25 0.00 25 75 0 14 0.00 14 76 0 24 0.00 24 77 0 18 0.00 18 78 1 14 6.67 15 79 0 16 0.00 16 80 0 17 0.00 17 81 0 12 0.00 12 82 0 17 0.00 17 83 1 17 5.56 18 84 0 25 0.00 25 85 1 17 5.56 18 CHH context =========== position count methylated count unmethylated % methylation coverage 1 18 31 36.73 49 2 5 25 16.67 30 3 4 31 11.43 35 4 3 28 9.68 31 5 5 36 12.20 41 6 3 43 6.52 46 7 2 52 3.70 54 8 1 62 1.59 63 9 2 52 3.70 54 10 1 57 1.72 58 11 1 59 1.67 60 12 0 70 0.00 70 13 4 55 6.78 59 14 0 68 0.00 68 15 1 65 1.52 66 16 1 74 1.33 75 17 1 81 1.22 82 18 1 71 1.39 72 19 1 72 1.37 73 20 1 78 1.27 79 21 0 82 0.00 82 22 1 69 1.43 70 23 0 85 0.00 85 24 1 94 1.05 95 25 1 78 1.27 79 26 1 89 1.11 90 27 0 72 0.00 72 28 0 84 0.00 84 29 0 72 0.00 72 30 1 61 1.61 62 31 0 79 0.00 79 32 0 88 0.00 88 33 3 80 3.61 83 34 1 85 1.16 86 35 0 79 0.00 79 36 2 68 2.86 70 37 1 62 1.59 63 38 0 77 0.00 77 39 1 87 1.14 88 40 1 77 1.28 78 41 0 70 0.00 70 42 2 69 2.82 71 43 0 66 0.00 66 44 2 76 2.56 78 45 3 85 3.41 88 46 2 69 2.82 71 47 0 68 0.00 68 48 0 81 0.00 81 49 0 73 0.00 73 50 0 79 0.00 79 51 0 81 0.00 81 52 1 65 1.52 66 53 0 79 0.00 79 54 3 90 3.23 93 55 1 80 1.23 81 56 1 82 1.20 83 57 1 77 1.28 78 58 0 71 0.00 71 59 1 84 1.18 85 60 1 95 1.04 96 61 1 84 1.18 85 62 0 95 0.00 95 63 1 88 1.12 89 64 0 89 0.00 89 65 1 77 1.28 78 66 3 89 3.26 92 67 1 69 1.43 70 68 2 98 2.00 100 69 2 92 2.13 94 70 0 94 0.00 94 71 1 87 1.14 88 72 1 83 1.19 84 73 0 87 0.00 87 74 2 74 2.63 76 75 1 78 1.27 79 76 0 74 0.00 74 77 3 79 3.66 82 78 1 71 1.39 72 79 0 66 0.00 66 80 0 71 0.00 71 81 1 84 1.18 85 82 0 88 0.00 88 83 2 79 2.47 81 84 2 81 2.41 83 85 2 63 3.08 65