Mercurial > repos > bgruening > canu

view test-data/canu_unitigs_result2.fa @ 0:4c8f32256fa8 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/canu commit b7904bf39167833b3d3648e250726615f75f7525
author bgruening
date Fri, 08 Jun 2018 04:43:41 -0400
parents
children
line wrap: on
line source

>tig00000001 len=287 reads=18 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
GTTATTATTATGTCCTACAAGCATTAATTAATTAACACACTTTAGTAAGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGC
AGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGG
AGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGTGATGTCTTATTTAAGGGGAACGTGTGGGCTATTTAGGTT
>tig00000002 len=251 reads=3 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
CTTTAGTAAGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGG
CTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTG
ATCCATCGTGATGTCTTATTTAAGGGGAACGTGTGGGCTATTTAGGTTTTT
>tig00000003 len=252 reads=3 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
TTTAGTAAGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGC
TCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGA
TCCATCGTGATGTCTTATTTAAGGGGAACGTGTGGGCTATTTAGGTTTTATT
>tig00000004 len=252 reads=1 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
TTAGTAAGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCT
CCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGAT
CCATCGTGATGTCTTATTTAAGGGGAACGTGTGGGCTATTTAGGTTTTATGG
>tig00000005 len=251 reads=1 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
GTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGT
CTCGCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGT
GATGTCTTATTTAAGGGGAACGTGTGGGCTATTTAGGTTTTATGACCCTGG
>tig00000006 len=250 reads=2 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
TGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTC
GCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGTGAT
GTCTTATTTAAGGGGAACGTGTGGGCTATTTAGGTTTTATGACCCTGAAG
>tig00000007 len=250 reads=1 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
CGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAA
TGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGTGATGTCT
TATTTAAGGGGAACGTGTGGGCTATTTAGGTTTTATGACCCTGAAGTAGG
>tig00000008 len=250 reads=1 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
GCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAAT
GCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGTGATGTCTT
ATTTAAGGGGAACGTGTGGGCTATTTAGGTTTTATGACCCTGAAGTAGGA
>tig00000009 len=252 reads=1 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
CCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATG
CTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGTGATGTCTTA
TTTAAGGGGAACGTGTGGGCTATTTAGGTTTTATGACCCTGAAGTAGGAACC
>tig00000010 len=308 reads=40 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
AATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATC
GCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGTGATGTCTTATTTAA
GGGGAACGTGTGGGCTATTTAGGTTTTATGACCCTGAAGTAGGAACCAGATGTCGGATACAGTTCACTTTAGCTACCCCCAAGTGTTATGGGCTAAGGCG
AATCTCGT
>tig00000011 len=244 reads=1 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
GTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTA
TCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGTGATGTCTTATTT
AAGGGGAACGTGTGGGCTATTTAGGTTTTATGACCCTGAAGTAG
>tig00000012 len=246 reads=1 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
AATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATC
GCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGTGATGTCTTATTTAA
GGGGAACGTGTGGGCTATTTAGGTTTTATGACCCTGTCTCTTATAC
>tig00000013 len=251 reads=2 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
AACACACTTTAGTAAGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTG
CTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGA
CCTGTGATCCATCGTGATGTCTGTCTCTTATACACATCTCCGAGCCCACGA
>tig00000014 len=251 reads=1 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
CCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATG
CTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGTGATGTCTGT
CTCTTATACACATCTCCGAGCCCACGAGACTAAGGCGAATATCGTATGCCG
>tig00000015 len=258 reads=2 covStat=1.00 gappedBases=no class=contig suggestRepeat=no suggestCircular=no
ATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCCAGAC
GAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGTGATAGACCTGTGATCCATCGTGATGTCTTATTTAAGTCTCTTATACACATCTCC
GAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTTCTGCTTGCAAAAAAAAAAAC