<tool id="jmoleditor" name="JMol Editor" tool_type="data_source">
    <description>A Chemical Structure Editor</description>
    <command interpreter="python">jmoleditor.py $output</command>
    <inputs action="http://localhost:8000/Jmoleditor/editor.htm" check_values="false" method="GET">
        <param name="GALAXY_URL" type="baseurl" value="/tool_runner" />
        <param name="URL" type="hidden" value="http://localhost:8000/Jmoleditor/editor.htm" />
        <param name="tool_id" type="hidden" value="jmoleditor" />
    </inputs>
    <request_param_translation>
        <request_param galaxy_name="URL_method" remote_name="URL_method" missing="post" />
        <request_param galaxy_name="URL" remote_name="URL" missing="" />
        <request_param galaxy_name="galaxyData" remote_name="galaxyData" missing="?" />
        <request_param galaxy_name="data_type" remote_name="data_type" missing="txt" />
        <request_param galaxy_name="output_label" remote_name="data_type" missing="txt" >
            <value_translation>
                <value galaxy_value="Molecule" remote_value="sdf" />
                <value galaxy_value="SMILES" remote_value="smi" />
            </value_translation>
        </request_param>
    </request_param_translation>
    <uihints minwidth="800"/>
    <outputs>
        <data name="output" format="smi" label='imported ${output_label} file'>
            <change_format>
                <when input="output_label" value="SMILES" format="smi"/>
            </change_format>
        </data>
    </outputs>
    <options sanitize="False" refresh="True"/>
    <help>

.. class:: infomark

**What this tool does**

Paint a structure and load it into your Galaxy history.

-----

.. class:: infomark

**Cite**

Jmol_: an open-source Java viewer for chemical structures in 3D

.. _Jmol: http://jmol.sourceforge.net/

    </help>
</tool>