Mercurial > repos > bgruening > cp_cellprofiler
diff cellprofiler.xml @ 2:78a16d8c8d5e draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools commit 1907942bef43b20edfdbd1d1b5eb1cac3602848b"
author | bgruening |
---|---|
date | Thu, 16 Apr 2020 05:40:08 -0400 |
parents | ba4fd9fbf924 |
children | a98608f3abc5 |
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--- a/cellprofiler.xml Thu Apr 09 08:14:24 2020 -0400 +++ b/cellprofiler.xml Thu Apr 16 05:40:08 2020 -0400 @@ -1,5 +1,5 @@ -<tool id="cp_cellprofiler" name="cellProfiler" version="@CP_VERSION@"> - <description>runs a cellProfiler pipeline assembled by all the cellProfiler tools upstream in the workflow</description> +<tool id="cp_cellprofiler" name="CellProfiler" version="@CP_VERSION@"> + <description>run a CellProfiler pipeline</description> <macros> <import>macros.xml</import> <xml name="test_assert_content" token_n="291"> @@ -31,11 +31,11 @@ <inputs> <param name="pipeline" type="data" format="txt" label="Pipeline file" help="A ready-to-run .cppipe file. It can be created with various CellProfiler modules." /> <param name="input_images" type="data" multiple="true" format="@FORMATS@" label="Images" /> - <param name="detailed_output" type="boolean" label="Detailed logging file?" help="If set, a detailed cellprofiler log file will be generated." /> + <param name="detailed_output" type="boolean" label="Detailed logging file?" help="If set, a detailed CellProfiler log file will be generated." /> </inputs> <outputs> - <collection name="pipeline_output" type="list" label="Cellprofiler pipeline output files"> + <collection name="pipeline_output" type="list" label="CellProfiler pipeline output files"> <discover_datasets pattern="__designation_and_ext__" visible="false" directory="output"/> </collection> <data format="txt" name="logs" from_work_dir="cp.log" label="CellProfiler log"> @@ -112,13 +112,13 @@ </tests> <help> - This tool runs a cellProfiler @CP_VERSION@ pipeline file. + This tool runs a CellProfiler @CP_VERSION@ pipeline file. *** Parameters *** images: multi-select image files - pipeline: cellProfiler pipeline file(.cppipe) file. + pipeline: CellProfiler pipeline file(.cppipe) file. *** Note ***