Mercurial > repos > bgruening > cp_cellprofiler4

comparison cellprofiler.xml @ 1:5a810dc963f4 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools commit 57a0433defa3cbc37ab34fbb0ebcfaeb680db8d5
author bgruening
date Sun, 05 Nov 2023 09:55:50 +0000
parents b333df978624
children f0656d0f2a4d
comparison
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0:b333df978624 1:5a810dc963f4
1 <tool id="cp_cellprofiler4" name="CellProfiler" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01"> 1 <tool id="cp_cellprofiler4" name="Run CellProfiler pipeline" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.01">
2 <description>run a CellProfiler pipeline</description> 2 <description>with CellProfiler 4</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 <token name="@VERSION_SUFFIX@">0</token> 5 <token name="@VERSION_SUFFIX@">1</token>
6 <xml name="test_assert_content" token_n="291"> 6 <xml name="test_assert_content" token_n="291">
7 <assert_contents> 7 <assert_contents>
8 <has_n_lines n="@N@" /> 8 <has_n_lines n="@N@" />
9 </assert_contents> 9 </assert_contents>
10 </xml> 10 </xml>
71 </conditional> 71 </conditional>
72 <param name="detailed_output" value="False" /> 72 <param name="detailed_output" value="False" />
73 <output_collection name="pipeline_output" type="list" count="7"> 73 <output_collection name="pipeline_output" type="list" count="7">
74 <element name="AS_09125_050116030001_D03f00d0.tif_Overlay"> 74 <element name="AS_09125_050116030001_D03f00d0.tif_Overlay">
75 <assert_contents> 75 <assert_contents>
76 <has_size value="168221"/> 76 <has_size value="182983"/>
77 </assert_contents> 77 </assert_contents>
78 </element> 78 </element>
79 <element name="Cells"> 79 <element name="Cells">
80 <expand macro="test_assert_content" n="290" /> 80 <expand macro="test_assert_content" n="290" />
81 </element> 81 </element>
104 </conditional> 104 </conditional>
105 <param name="detailed_output" value="True" /> 105 <param name="detailed_output" value="True" />
106 <output_collection name="pipeline_output" type="list" count="7"> 106 <output_collection name="pipeline_output" type="list" count="7">
107 <element name="AS_09125_050116030001_D03f00d0.tif_Overlay"> 107 <element name="AS_09125_050116030001_D03f00d0.tif_Overlay">
108 <assert_contents> 108 <assert_contents>
109 <has_size value="168221"/> 109 <has_size value="182983"/>
110 </assert_contents> 110 </assert_contents>
111 </element> 111 </element>
112 <element name="Cells"> 112 <element name="Cells">
113 <expand macro="test_assert_content" n="290" /> 113 <expand macro="test_assert_content" n="290" />
114 </element> 114 </element>
143 </conditional> 143 </conditional>
144 <param name="detailed_output" value="False" /> 144 <param name="detailed_output" value="False" />
145 <output_collection name="pipeline_output" type="list" count="7"> 145 <output_collection name="pipeline_output" type="list" count="7">
146 <element name="AS_09125_050116030001_D03f00d0_Overlay"> 146 <element name="AS_09125_050116030001_D03f00d0_Overlay">
147 <assert_contents> 147 <assert_contents>
148 <has_size value="168221"/> 148 <has_size value="182983"/>
149 </assert_contents> 149 </assert_contents>
150 </element> 150 </element>
151 <element name="Cells"> 151 <element name="Cells">
152 <expand macro="test_assert_content" n="290" /> 152 <expand macro="test_assert_content" n="290" />
153 </element> 153 </element>
176 </conditional> 176 </conditional>
177 <param name="detailed_output" value="True" /> 177 <param name="detailed_output" value="True" />
178 <output_collection name="pipeline_output" type="list" count="7"> 178 <output_collection name="pipeline_output" type="list" count="7">
179 <element name="AS_09125_050116030001_D03f00d0_Overlay"> 179 <element name="AS_09125_050116030001_D03f00d0_Overlay">
180 <assert_contents> 180 <assert_contents>
181 <has_size value="168221"/> 181 <has_size value="182983"/>
182 </assert_contents> 182 </assert_contents>
183 </element> 183 </element>
184 <element name="Cells"> 184 <element name="Cells">
185 <expand macro="test_assert_content" n="290" /> 185 <expand macro="test_assert_content" n="290" />
186 </element> 186 </element>