Mercurial > repos > bgruening > ctb_im_xcos
comparison macros.xml @ 1:9b6210854c8c draft default tip
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/chemicaltoolbox/im-pipelines commit d1d0ec4ebc97b2274b18a0aab99f41addd5357ae"
author | bgruening |
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date | Mon, 27 Jul 2020 11:30:49 -0400 |
parents | 73164cea9b60 |
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0:73164cea9b60 | 1:9b6210854c8c |
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1 <macros> | 1 <macros> |
2 <token name="@TOOL_VERSION@">1.1.3</token> | 2 <token name="@TOOL_VERSION@">1.1.4</token> |
3 <xml name="requirements"> | 3 <xml name="requirements"> |
4 <requirements> | 4 <requirements> |
5 <requirement type="package" version="@TOOL_VERSION@">im-pipelines</requirement> | 5 <requirement type="package" version="@TOOL_VERSION@">im-pipelines</requirement> |
6 </requirements> | 6 </requirements> |
7 </xml> | 7 </xml> |
8 | 8 |
9 <xml name="input"> | 9 <xml name="input"> |
10 <param name="infile" type="data" format="sdf" label="Input file" help="Input file in SDF or JSON format"/> | 10 <param name="infile" type="data" format="sdf" label="Input file" help="Input file in SDF format"/> |
11 </xml> | 11 </xml> |
12 | 12 |
13 <xml name="outputs" token_output_format="sdf" token_filetype="sdf"> | 13 <xml name="outputs" token_output_format="sdf" token_filetype="sdf"> |
14 <outputs> | 14 <outputs> |
15 <data name="outfile" format="@FILETYPE@" label="Output (@FILETYPE@) for ${tool.name}" from_work_dir="outp.@OUTPUT_FORMAT@"/> | 15 <data name="outfile" format="@FILETYPE@" label="Output (@FILETYPE@) for ${tool.name}" from_work_dir="outp.@OUTPUT_FORMAT@"/> |
19 | 19 |
20 <xml name="citations"> | 20 <xml name="citations"> |
21 <citations> | 21 <citations> |
22 <citation type="bibtex"> | 22 <citation type="bibtex"> |
23 @article{rdkit, | 23 @article{rdkit, |
24 author = {Greg Landrum and others}, | 24 author = {Greg Landrum and others}, |
25 title = {RDKit: Open-source cheminformatics}, | 25 title = {RDKit: Open-source cheminformatics}, |
26 url = {http://www.rdkit.org} | 26 url = {http://www.rdkit.org} |
27 }</citation> | 27 }</citation> |
28 <citation type="bibtex"> | 28 <citation type="bibtex"> |
29 @article{im-pipelines, | 29 @article{im-pipelines, |
30 author = {Tim Dudgeon and others}, | 30 author = {Tim Dudgeon and others}, |
31 title = {InformaticsMatters pipeline components for cheminformatics and computational chemistry.}, | 31 title = {InformaticsMatters pipeline components for cheminformatics and computational chemistry.}, |
32 url = {https://github.com/InformaticsMatters/pipelines} | 32 url = {https://github.com/InformaticsMatters/pipelines} |
33 }</citation> | 33 }</citation> |
34 <yield /> | 34 <yield /> |
35 </citations> | 35 </citations> |
36 </xml> | 36 </xml> |
37 </macros> | 37 </macros> |