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comparison bigwigCompare.xml @ 9:c53a73b8eef9 draft

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author bgruening
date Tue, 10 Dec 2013 12:13:18 -0500
parents b5da81864541
children 135f3bae5c56
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8:1c5ed9126db6 9:c53a73b8eef9
33 <regex match="Error:" /> 33 <regex match="Error:" />
34 <regex match="EXception:" /> 34 <regex match="EXception:" />
35 </stdio> 35 </stdio>
36 <inputs> 36 <inputs>
37 <param name="bigwigFile1" format="bigwig" type="data" label="Treatment bigwig file" /> 37 <param name="bigwigFile1" format="bigwig" type="data" label="Treatment bigwig file" />
38 <param name="bigwigFile2" format="bigwig" type="data" label="Input bigwig file" /> 38 <param name="bigwigFile2" format="bigwig" type="data" label="bigWig file" />
39 39
40 <param name="comparison_type" type="select" 40 <param name="comparison_type" type="select"
41 label="How to compare the two files" 41 label="How to compare the two files"
42 help="The reciprocal ratio returns the negative of the inverse of the ratio if the ratio is less than 0. The resulting values are interpreted as negative fold changes." > 42 help="The reciprocal ratio returns the negative of the inverse of the ratio if the ratio is less than 0. The resulting values are interpreted as negative fold changes." >
43 <option value="log2" selected="true">log2 ratio</option> 43 <option value="log2" selected="true">log2 ratio</option>