Mercurial > repos > bgruening > deeptools

comparison deepTools_macros.xml @ 9:c53a73b8eef9 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author bgruening
date Tue, 10 Dec 2013 12:13:18 -0500
parents 1c5ed9126db6
children 135f3bae5c56
comparison
equal deleted inserted replaced
8:1c5ed9126db6 9:c53a73b8eef9
41 <macro name="requirements"> 41 <macro name="requirements">
42 <requirements> 42 <requirements>
43 <requirement type="package" >samtools</requirement> 43 <requirement type="package" >samtools</requirement>
44 <requirement type="package" >deepTools</requirement> 44 <requirement type="package" >deepTools</requirement>
45 <requirement type="package" >ucsc_tools</requirement> 45 <requirement type="package" >ucsc_tools</requirement>
46 <requirement type="package" version="1.5.1_323fa6bf083c9d40e5092a6364a4ab8fee57507a">deepTools</requirement> 46 <requirement type="package" version="1.5.4_fada41ab04f78c4c78d10c7a216e5c3160e8c36e">deepTools</requirement>
47 <requirement type="package" version="0.1">ucsc_tools</requirement> 47 <requirement type="package" version="0.1">ucsc_tools</requirement>
48 <requirement type="package" version="1.7.1">numpy</requirement> 48 <requirement type="package" version="1.7.1">numpy</requirement>
49 <requirement type="package" version="0.7.7">pysam</requirement> 49 <requirement type="package" version="0.7.7">pysam</requirement>
50 <requirement type="package" version="1.2.1">matplotlib</requirement>
50 <requirement type="package" version="0.1.19">samtools</requirement> 51 <requirement type="package" version="0.1.19">samtools</requirement>
52 <requirement type="package" version="12-2013">bx-python</requirement>
51 <yield /> 53 <yield />
52 </requirements> 54 </requirements>
53 </macro> 55 </macro>
54 56
55 <token name="@REFERENCES@"> 57 <token name="@REFERENCES@">
66 .. _project site: https://github.com/fidelram/deepTools 68 .. _project site: https://github.com/fidelram/deepTools
67 69
68 </token> 70 </token>
69 71
70 <macro name="multiple_input_bams"> 72 <macro name="multiple_input_bams">
71 <repeat name="input_files" title="Input files" min="2"> 73 <repeat name="input_files" title="BAM files" min="2">
72 <param name="bamfile" type="data" format="bam" 74 <param name="bamfile" type="data" format="bam"
73 label="Bam file" 75 label="Bam file"
74 help="The BAM file must be sorted."/> 76 help="The BAM file must be sorted."/>
75 <param name="label" type="text" size="30" optional="true" value="" 77 <param name="label" type="text" size="30" optional="true" value=""
76 label="Label" 78 label="Label"