Mercurial > repos > bgruening > deeptools_bam_compare

comparison bamCompare.xml @ 6:8e41fe2f3661 draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 43d23f495200449aec91a41fd537603014aa93ba-dirty
author bgruening
date Sun, 24 Apr 2016 17:18:27 -0400
parents 2f27bfe8b570
children 89f6d2283317
comparison
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5:eb48e332a41f 6:8e41fe2f3661
171 </change_format> 171 </change_format>
172 </data> 172 </data>
173 </outputs> 173 </outputs>
174 <tests> 174 <tests>
175 <test> 175 <test>
176 <param name="bamFile1" value="bowtie2-test1.bam" ftype="bam" /> 176 <param name="bamFile1" value="bowtie2 test1.bam" ftype="bam" />
177 <param name="bamFile2" value="bowtie2-test1.bam" ftype="bam" /> 177 <param name="bamFile2" value="bowtie2 test1.bam" ftype="bam" />
178 <param name="showAdvancedOpt" value="no" /> 178 <param name="showAdvancedOpt" value="no" />
179 <param name="outFileFormat" value="bigwig" /> 179 <param name="outFileFormat" value="bigwig" />
180 <param name="outFileFormat" value="bedgraph" /> 180 <param name="outFileFormat" value="bedgraph" />
181 <param name="binSize" value="5" /> 181 <param name="binSize" value="5" />
182 <param name="type" value="ratio" /> 182 <param name="type" value="ratio" />
183 <output name="outFileName" file="bamCompare_result1.bg" ftype="bedgraph" /> 183 <output name="outFileName" file="bamCompare_result1.bg" ftype="bedgraph" />
184 </test> 184 </test>
185 <test> 185 <test>
186 <param name="bamFile1" value="bowtie2-test1.bam" ftype="bam" /> 186 <param name="bamFile1" value="bowtie2 test1.bam" ftype="bam" />
187 <param name="bamFile2" value="bowtie2-test1.bam" ftype="bam" /> 187 <param name="bamFile2" value="bowtie2 test1.bam" ftype="bam" />
188 <param name="showAdvancedOpt" value="yes" /> 188 <param name="showAdvancedOpt" value="yes" />
189 <param name="outFileFormat" value="bigwig" /> 189 <param name="outFileFormat" value="bigwig" />
190 <param name="outFileFormat" value="bigwig" /> 190 <param name="outFileFormat" value="bigwig" />
191 <param name="binSize" value="10" /> 191 <param name="binSize" value="10" />
192 <param name="type" value="ratio" /> 192 <param name="type" value="ratio" />