Mercurial > repos > bgruening > deeptools_bam_compare

comparison bamCompare.xml @ 23:c09c23eaf116 draft

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planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 3cefc7d64faa53ef9a4e5984c7b275fc47cbdaaf
author bgruening
date Wed, 20 Feb 2019 08:00:54 -0500
parents 59cbb059cd1e
children 5f6d123679f4
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22:59cbb059cd1e 23:c09c23eaf116
164 <expand macro="read_processing_options" /> 164 <expand macro="read_processing_options" />
165 165
166 <expand macro="skipNAs" /> 166 <expand macro="skipNAs" />
167 <param argument="--skipZeroOverZero" type="select" label="Skip bins of no coverage" 167 <param argument="--skipZeroOverZero" type="select" label="Skip bins of no coverage"
168 help="Skip bins where BOTH files lack coverage."> 168 help="Skip bins where BOTH files lack coverage.">
169 <option value="no" selected="true">No</option> 169 <option value="" selected="true">No</option>
170 <option value="yes">Yes, skip them.</option> 170 <option value="--skipZeroOverZero">Yes, skip them.</option>
171 </param> 171 </param>
172 172
173 <param argument="--ignoreForNormalization" type="text" value="" size="50" 173 <param argument="--ignoreForNormalization" type="text" value="" size="50"
174 label="regions that should be excluded for calculating the scaling factor" 174 label="regions that should be excluded for calculating the scaling factor"
175 help="Sometimes it makes sense to exclude certain regions when calculating the scaling factor. 175 help="Sometimes it makes sense to exclude certain regions when calculating the scaling factor.