Mercurial > repos > bgruening > deeptools_bam_compare
diff bamCompare.xml @ 11:8f2a1286b61c draft
planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 999ec5d9b5882702497d8117a7d26536a67e19ca
author | bgruening |
---|---|
date | Tue, 24 Jan 2017 04:59:05 -0500 |
parents | 89f6d2283317 |
children | 2a1b4e95bdf7 |
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--- a/bamCompare.xml Mon Dec 05 08:12:20 2016 -0500 +++ b/bamCompare.xml Tue Jan 24 04:59:05 2017 -0500 @@ -114,6 +114,7 @@ <option value="ratio">Compute the ratio of the number of reads</option> <option value="subtract">Compute difference (subtract input from treatment) of the number of reads</option> <option value="add">Compute the sum of number of reads</option> + <option value="mean">Compute the mean of the number of reads between the two files</option> <option value="reciprocal_ratio">Computes the fold change. If the fold change is less than 1, the negative of the inverse is reported. E.g. A fold change of 10 to 5 would be reported not as 0.5 but as -2</option> <option value="first">Returns the scaled value of the first BAM file</option> <option value="second">Returns the scaled value of the second BAM file</option> @@ -125,6 +126,7 @@ <expand macro="pseudocount" /> </when> <when value="add" /> + <when value="mean" /> <when value="first" /> <when value="second" /> <when value="reciprocal_ratio">