Mercurial > repos > bgruening > deeptools_bam_pe_fragmentsize

comparison bamPEFragmentSize.xml @ 19:f011488450e6 draft

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planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 5a01e3a370130f32a82d5436504371ed95be1754
author bgruening
date Thu, 05 Apr 2018 10:50:58 -0400
parents 68932756bf49
children ec103ad3c567
comparison
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18:2c04ee4b0174 19:f011488450e6
18 #end if 18 #end if
19 #if $histogram: 19 #if $histogram:
20 --histogram '$histogram_outfile' 20 --histogram '$histogram_outfile'
21 --plotFileFormat '$outFileFormat' 21 --plotFileFormat '$outFileFormat'
22 #end if 22 #end if
23 --plotTitle "$plotTitle" 23 --plotTitle '$plotTitle'
24 #if $advancedOpt.showAdvancedOpt == 'yes' 24 #if $advancedOpt.showAdvancedOpt == 'yes'
25 --binSize '$advancedOpt.binSize' 25 --binSize '$advancedOpt.binSize'
26 --distanceBetweenBins '$advancedOpt.distanceBetweenBins' 26 --distanceBetweenBins '$advancedOpt.distanceBetweenBins'
27 $advancedOpt.logScale 27 $advancedOpt.logScale
28 --maxFragmentLength '$advancedOpt.maxFragmentLength' 28 --maxFragmentLength '$advancedOpt.maxFragmentLength'