Mercurial > repos > bgruening > deeptools_correct_gc_bias

comparison correctGCBias.xml @ 10:297bccb7d5c6 draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 0eeb2e1a184186ba5ac044136e71b943e2af0f09
author bgruening
date Mon, 05 Dec 2016 08:11:34 -0500
parents 7e5e30b9755d
children 3f84770b69cd
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9:4eef86c1e82f 10:297bccb7d5c6
45 <param name="GCbiasFrequenciesFile" value="computeGCBias_result1.tabular" ftype="tabular" /> 45 <param name="GCbiasFrequenciesFile" value="computeGCBias_result1.tabular" ftype="tabular" />
46 <param name="bamInput" value="paired_chr2L.bam" ftype="bam" /> 46 <param name="bamInput" value="paired_chr2L.bam" ftype="bam" />
47 <param name="ref_source" value="history" /> 47 <param name="ref_source" value="history" />
48 <param name="input1" value="sequence.2bit" /> 48 <param name="input1" value="sequence.2bit" />
49 <param name="effectiveGenomeSize_opt" value="specific" /> 49 <param name="effectiveGenomeSize_opt" value="specific" />
50 <param name="effectiveGenomeSize" value="23011544" /> 50 <param name="effectiveGenomeSize" value="10050" />
51 <output name="outFileName" file="correctGCBias_result1.bam" ftype="bam" /> 51 <output name="outFileName" file="correctGCBias_result1.bam" ftype="bam" lines_diff="100" />
52 </test> 52 </test>
53 </tests> 53 </tests>
54 <help> 54 <help>
55 <![CDATA[ 55 <![CDATA[
56 56