Mercurial > repos > bgruening > deeptools_correct_gc_bias

comparison deepTools_macros.xml @ 6:8587a5caa8a6 draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 43d23f495200449aec91a41fd537603014aa93ba-dirty
author bgruening
date Sun, 24 Apr 2016 17:03:06 -0400
parents bbbf40fcf059
children 8f0137a68f02
comparison
equal deleted inserted replaced
5:bbbf40fcf059 6:8587a5caa8a6
66 </xml> 66 </xml>
67 67
68 <xml name="region_limit_operation"> 68 <xml name="region_limit_operation">
69 <param argument="--region" type="text" value="" 69 <param argument="--region" type="text" value=""
70 label="Region of the genome to limit the operation to" 70 label="Region of the genome to limit the operation to"
71 help="This is useful when testing parameters to reduce the time required. The format is chr:start:end, for example &quot;chr10&quot; or &quot;chr10:456700:891000&quot;." /> 71 help="This is useful when testing parameters to reduce the time required. The format is chr:start:end, for example &quot;chr10&quot; or &quot;chr10:456700:891000&quot;.">
72 <sanitizer>
73 <valid initial="string.letters,string.digits">
74 <add value="|"/>
75 </valid>
76 </sanitizer>
77 </param>
72 </xml> 78 </xml>
73 79
74 <token name="@THREADS@">--numberOfProcessors "\${GALAXY_SLOTS:-4}"</token> 80 <token name="@THREADS@">--numberOfProcessors "\${GALAXY_SLOTS:-4}"</token>
75 <token name="@WRAPPER_VERSION@">2.2.2</token> 81 <token name="@WRAPPER_VERSION@">2.2.3</token>
76 <xml name="requirements"> 82 <xml name="requirements">
77 <requirements> 83 <requirements>
78 <requirement type="package" version="2.7.10">python</requirement> 84 <requirement type="package" version="2.7.10">python</requirement>
79 <requirement type="binary">@BINARY@</requirement> 85 <requirement type="binary">@BINARY@</requirement>
80 <requirement type="package" version="2.2.2">deepTools</requirement> 86 <requirement type="package" version="2.2.3">deepTools</requirement>
81 <yield /> 87 <yield />
82 </requirements> 88 </requirements>
83 <expand macro="stdio" /> 89 <expand macro="stdio" />
84 <version_command>@BINARY@ --version</version_command> 90 <version_command>@BINARY@ --version</version_command>
85 </xml> 91 </xml>
300 .. _help site: https://deeptools.readthedocs.org/ 306 .. _help site: https://deeptools.readthedocs.org/
301 307
302 </token> 308 </token>
303 <xml name="citations"> 309 <xml name="citations">
304 <citations> 310 <citations>
305 <citation type="doi">10.1093/nar/gku365</citation> 311 <citation type="doi">10.1093/nar/gkw257</citation>
306 <yield /> 312 <yield />
307 </citations> 313 </citations>
308 </xml> 314 </xml>
309 315
310 <xml name="multiple_input_bams"> 316 <xml name="multiple_input_bams">