Mercurial > repos > bgruening > deeptools_plot_fingerprint

comparison plotFingerprint.xml @ 19:a064962bb6e2 draft

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planemo upload for repository https://github.com/deeptools/deepTools/tree/master/galaxy/wrapper/ commit 5a01e3a370130f32a82d5436504371ed95be1754
author bgruening
date Thu, 05 Apr 2018 10:59:58 -0400
parents 3fbec7fd02dc
children 664bd6df0959
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18:35c234f370b6 19:a064962bb6e2
22 #if $output.saveQualityMetrics: 22 #if $output.saveQualityMetrics:
23 --outQualityMetrics '$outFileQualityMetrics' 23 --outQualityMetrics '$outFileQualityMetrics'
24 #if $output.JSDsample: 24 #if $output.JSDsample:
25 #if "'{}'".format($output.JSDsample.display_name) in $labels: 25 #if "'{}'".format($output.JSDsample.display_name) in $labels:
26 #set JSDidx = $labels.index("'{}'".format($output.JSDsample.display_name)) 26 #set JSDidx = $labels.index("'{}'".format($output.JSDsample.display_name))
27 --JSDsample "${JSDidx}.bam" 27 --JSDsample '${JSDidx}.bam'
28 #end if 28 #end if
29 #end if 29 #end if
30 #end if 30 #end if
31 #else 31 #else
32 --plotFileFormat 'png' 32 --plotFileFormat 'png'