Mercurial > repos > bgruening > deeptools_plot_profile

comparison plotProfiler.xml @ 8:b8e86bbb9de3 draft

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planemo upload for repository https://github.com/fidelram/deepTools/tree/master/galaxy/wrapper/ commit 2c5f94de9ddf6798e49b7e9c340c841ca2bfbcfe
author bgruening
date Tue, 20 Sep 2016 03:07:46 -0400
parents af7e456ef4f9
children 6178c2e448eb
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7:f454a9fe7af9 8:b8e86bbb9de3
13 --matrixFile "$matrixFile" 13 --matrixFile "$matrixFile"
14 --outFileName "$outFileName" 14 --outFileName "$outFileName"
15 15
16 #if $output.showOutputSettings == "yes" 16 #if $output.showOutputSettings == "yes"
17 --plotFileFormat $output.outFileFormat 17 --plotFileFormat $output.outFileFormat
18
19 #if $output.dpi:
20 --dpi "$output.dpi"
21 #end if
18 22
19 #if $output.saveSortedRegions: 23 #if $output.saveSortedRegions:
20 --outFileSortedRegions '$outFileSortedRegions' 24 --outFileSortedRegions '$outFileSortedRegions'
21 #end if 25 #end if
22 #else 26 #else
89 </when> 93 </when>
90 </conditional> 94 </conditional>
91 95
92 <expand macro="input_graphic_output_settings"> 96 <expand macro="input_graphic_output_settings">
93 <expand macro="input_image_file_format" /> 97 <expand macro="input_image_file_format" />
98 <expand macro="output_dpi" />
94 </expand> 99 </expand>
95 100
96 <conditional name="advancedOpt"> 101 <conditional name="advancedOpt">
97 <param name="showAdvancedOpt" type="select" label="Show advanced options" > 102 <param name="showAdvancedOpt" type="select" label="Show advanced options" >
98 <option value="no" selected="true">no</option> 103 <option value="no" selected="true">no</option>