Mercurial > repos > bgruening > deeptools_workflows
comparison readme.rst @ 0:16fc7f46ee23 draft default tip
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| author | bgruening |
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| date | Thu, 03 Apr 2014 11:11:15 -0400 |
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| 1 This package contains a collection of Galaxy workflows utilising deepTools. | |
| 2 | |
| 3 See http://www.galaxyproject.org for information about the Galaxy Project. | |
| 4 | |
| 5 | |
| 6 Sample Data | |
| 7 =========== | |
| 8 | |
| 9 Sample data can be obtained from http://deeptools.ie-freiburg.mpg.de/library or you | |
| 10 can use aligned reads in BAM or SAM format. | |
| 11 | |
| 12 | |
| 13 | |
| 14 Citation | |
| 15 ======== | |
| 16 | |
| 17 If you use this workflow directly, or a derivative of it, or the associated | |
| 18 deepTools wrappers for Galaxy, in work leading to a scientific publication, | |
| 19 please cite: | |
| 20 | |
| 21 {publication under review} | |
| 22 | |
| 23 | |
| 24 Availability | |
| 25 ============ | |
| 26 | |
| 27 This workflow is available on the main Galaxy Tool Shed: | |
| 28 | |
| 29 http://toolshed.g2.bx.psu.edu/view/bgruening/deeptools_workflows | |
| 30 | |
| 31 Development is being done on github: | |
| 32 | |
| 33 https://github.com/fidelram/deepTools | |
| 34 | |
| 35 | |
| 36 Dependencies | |
| 37 ============ | |
| 38 | |
| 39 These dependencies should be resolved automatically via the Galaxy Tool Shed: | |
| 40 | |
| 41 * http://toolshed.g2.bx.psu.edu/view/bgruening/deeptools |