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comparison test-data/diamond_results.xml @ 7:62c9df8382c2 draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/diamond commit b2d290a8b609ebbc7f4b93716370143c41062ad4"
author bgruening
date Tue, 03 Dec 2019 17:40:05 -0500
parents 64be1ac21109
children 54f751e413f4
comparison
equal deleted inserted replaced
6:64be1ac21109 7:62c9df8382c2
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> 2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
3 <BlastOutput> 3 <BlastOutput>
4 <BlastOutput_program>blastp</BlastOutput_program> 4 <BlastOutput_program>blastp</BlastOutput_program>
5 <BlastOutput_version>diamond 0.9.21</BlastOutput_version> 5 <BlastOutput_version>diamond 0.9.29</BlastOutput_version>
6 <BlastOutput_reference>Benjamin Buchfink, Xie Chao, and Daniel Huson (2015), &quot;Fast and sensitive protein alignment using DIAMOND&quot;, Nature Methods 12:59-60.</BlastOutput_reference> 6 <BlastOutput_reference>Benjamin Buchfink, Xie Chao, and Daniel Huson (2015), &quot;Fast and sensitive protein alignment using DIAMOND&quot;, Nature Methods 12:59-60.</BlastOutput_reference>
7 <BlastOutput_db>.dmnd</BlastOutput_db> 7 <BlastOutput_db></BlastOutput_db>
8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> 8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
9 <BlastOutput_query-def>sequence</BlastOutput_query-def> 9 <BlastOutput_query-def>sequence</BlastOutput_query-def>
10 <BlastOutput_query-len>283</BlastOutput_query-len> 10 <BlastOutput_query-len>283</BlastOutput_query-len>
11 <BlastOutput_param> 11 <BlastOutput_param>
12 <Parameters> 12 <Parameters>
31 <Hit_accession>AAD44166.1</Hit_accession> 31 <Hit_accession>AAD44166.1</Hit_accession>
32 <Hit_len>284</Hit_len> 32 <Hit_len>284</Hit_len>
33 <Hit_hsps> 33 <Hit_hsps>
34 <Hsp> 34 <Hsp>
35 <Hsp_num>1</Hsp_num> 35 <Hsp_num>1</Hsp_num>
36 <Hsp_bit-score>541.2</Hsp_bit-score> 36 <Hsp_bit-score>547.4</Hsp_bit-score>
37 <Hsp_score>1393</Hsp_score> 37 <Hsp_score>1409</Hsp_score>
38 <Hsp_evalue>2.0e-158</Hsp_evalue> 38 <Hsp_evalue>2.7e-160</Hsp_evalue>
39 <Hsp_query-from>1</Hsp_query-from> 39 <Hsp_query-from>1</Hsp_query-from>
40 <Hsp_query-to>284</Hsp_query-to> 40 <Hsp_query-to>284</Hsp_query-to>
41 <Hsp_hit-from>1</Hsp_hit-from> 41 <Hsp_hit-from>1</Hsp_hit-from>
42 <Hsp_hit-to>284</Hsp_hit-to> 42 <Hsp_hit-to>284</Hsp_hit-to>
43 <Hsp_query-frame>0</Hsp_query-frame> 43 <Hsp_query-frame>0</Hsp_query-frame>
44 <Hsp_hit-frame>0</Hsp_hit-frame> 44 <Hsp_hit-frame>0</Hsp_hit-frame>
45 <Hsp_identity>283</Hsp_identity> 45 <Hsp_identity>283</Hsp_identity>
46 <Hsp_positive>283</Hsp_positive> 46 <Hsp_positive>283</Hsp_positive>
47 <Hsp_gaps>1</Hsp_gaps> 47 <Hsp_gaps>1</Hsp_gaps>
48 <Hsp_align-len>284</Hsp_align-len> 48 <Hsp_align-len>284</Hsp_align-len>
49 <Hsp_qseq>LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFIL-FTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLXXXXXXXXXXXXXSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY</Hsp_qseq> 49 <Hsp_qseq>LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFIL-FTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILXXXXXXXXXXSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY</Hsp_qseq>
50 <Hsp_hseq>LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFILPFTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLXXXXXXXXXXXXXSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY</Hsp_hseq> 50 <Hsp_hseq>LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFILPFTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILXXXXXXXXXXSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY</Hsp_hseq>
51 <Hsp_midline>LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFIL FTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLXXXXXXXXXXXXXSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY</Hsp_midline> 51 <Hsp_midline>LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFIL FTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILXXXXXXXXXXSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY</Hsp_midline>
52 </Hsp> 52 </Hsp>
53 </Hit_hsps> 53 </Hit_hsps>
54 </Hit> 54 </Hit>
55 </Iteration_hits> 55 </Iteration_hits>
56 <Iteration_stat> 56 <Iteration_stat>