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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/diamond commit 41ed290dd45d61eaf0dffa0cfc61202e03bc1589
author | iuc |
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date | Thu, 02 Nov 2023 11:14:39 +0000 |
parents | 1e3323a44643 |
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<?xml version="1.0"?> <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd"> <BlastOutput> <BlastOutput_program>blastp</BlastOutput_program> <BlastOutput_version>diamond 2.0.15</BlastOutput_version> <BlastOutput_reference>Benjamin Buchfink, Xie Chao, and Daniel Huson (2015), "Fast and sensitive protein alignment using DIAMOND", Nature Methods 12:59-60.</BlastOutput_reference> <BlastOutput_db></BlastOutput_db> <BlastOutput_query-ID>Query_1</BlastOutput_query-ID> <BlastOutput_query-def>sequence</BlastOutput_query-def> <BlastOutput_query-len>283</BlastOutput_query-len> <BlastOutput_param> <Parameters> <Parameters_matrix>blosum62</Parameters_matrix> <Parameters_expect>0.001</Parameters_expect> <Parameters_gap-open>11</Parameters_gap-open> <Parameters_gap-extend>1</Parameters_gap-extend> <Parameters_filter>F</Parameters_filter> </Parameters> </BlastOutput_param> <BlastOutput_iterations> <Iteration> <Iteration_iter-num>1</Iteration_iter-num> <Iteration_query-ID>Query_1</Iteration_query-ID> <Iteration_query-def>sequence</Iteration_query-def> <Iteration_query-len>283</Iteration_query-len> <Iteration_hits> <Hit> <Hit_num>1</Hit_num> <Hit_id>gi|5524211|gb|AAD44166.1|</Hit_id> <Hit_def></Hit_def> <Hit_accession>AAD44166</Hit_accession> <Hit_len>284</Hit_len> <Hit_hsps> <Hsp> <Hsp_num>1</Hsp_num> <Hsp_bit-score>550</Hsp_bit-score> <Hsp_score>1417</Hsp_score> <Hsp_evalue>1.44e-205</Hsp_evalue> <Hsp_query-from>1</Hsp_query-from> <Hsp_query-to>283</Hsp_query-to> <Hsp_hit-from>1</Hsp_hit-from> <Hsp_hit-to>284</Hsp_hit-to> <Hsp_query-frame>0</Hsp_query-frame> <Hsp_hit-frame>0</Hsp_hit-frame> <Hsp_identity>283</Hsp_identity> <Hsp_positive>283</Hsp_positive> <Hsp_gaps>1</Hsp_gaps> <Hsp_align-len>284</Hsp_align-len> <Hsp_qseq>LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFIL-FTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILXXXXXXXALLSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY</Hsp_qseq> <Hsp_hseq>LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFILPFTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILXXXXXXXALLSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY</Hsp_hseq> <Hsp_midline>LCLYTHIGRNIYYGSYLYSETWNTGIMLLLITMATAFMGYVLPWGQMSFWGATVITNLFSAIPYIGTNLVEWIWGGFSVDKATLNRFFAFHFIL FTMVALAGVHLTFLHETGSNNPLGLTSDSDKIPFHPYYTIKDFLGLLILXXXXXXXALLSPDMLGDPDNHMPADPLNTPLHIKPEWYFLFAYAILRSVPNKLGGVLALFLSIVILGLMPFLHTSKHRSMMLRPLSQALFWTLTMDLLTLTWIGSQPVEYPYTIIGQMASILYFSIILAFLPIAGXIENY</Hsp_midline> </Hsp> </Hit_hsps> </Hit> </Iteration_hits> <Iteration_stat> <Statistics> <Statistics_db-num>2</Statistics_db-num> <Statistics_db-len>568</Statistics_db-len> <Statistics_hsp-len>0</Statistics_hsp-len> <Statistics_eff-space>0</Statistics_eff-space> <Statistics_kappa>0.041000</Statistics_kappa> <Statistics_lambda>0.267000</Statistics_lambda> <Statistics_entropy>0</Statistics_entropy> </Statistics> </Iteration_stat> </Iteration> </BlastOutput_iterations> </BlastOutput>