Mercurial > repos > bgruening > edta

comparison annotate_pan_genome.sh @ 0:f1a157358d4d draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/edta commit 24cb0421330e54b144b3e6f1be4ae35ac0e48c1c
author bgruening
date Sun, 16 Oct 2022 12:41:19 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:f1a157358d4d
1 #!/usr/bin/env bash
2
3 lib=NAM.EDTA1.8.0.MTEC02052020.TElib.fa
4 genome=($1)
5
6 RepeatMasker -pa 36 -q -div 40 -lib $lib -cutoff 225 -gff $genome