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comparison flye.xml @ 5:de24438c9988 draft

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/flye commit 642e538e424b2fed32a0b2a8b030962d58fe9341"
author bgruening
date Mon, 02 Nov 2020 17:54:14 +0000
parents 3ee0ef312022
children 0284be52bfcf
comparison
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4:3ee0ef312022 5:de24438c9988
1 <tool id="flye" name="Flye assembly" version="2.6"> 1 <tool id="flye" name="Flye assembly" version="2.6+galaxy0">
2 <description>of long and error-prone reads</description> 2 <description>of long and error-prone reads</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
10 10
11 #for $counter, $input in enumerate($inputs): 11 #for $counter, $input in enumerate($inputs):
12 12
13 #if $input.is_of_type('fastqsanger', 'fastq'): 13 #if $input.is_of_type('fastqsanger', 'fastq'):
14 #set $ext = 'fastq' 14 #set $ext = 'fastq'
15 #elif $input.is_of_type('fastqsanger.gz'): 15 #elif $input.is_of_type('fastqsanger.gz', 'fastq.gz'):
16 #set $ext = 'fastq.gz' 16 #set $ext = 'fastq.gz'
17 #elif $input.is_of_type('fasta.gz'): 17 #elif $input.is_of_type('fasta.gz'):
18 #set $ext = 'fasta.gz' 18 #set $ext = 'fasta.gz'
19 #elif $input.is_of_type('fasta'): 19 #elif $input.is_of_type('fasta'):
20 #set $ext = 'fasta' 20 #set $ext = 'fasta'