Mercurial > repos > bgruening > gfastats

comparison test-data/test_12_stats.tabular @ 3:8ccbf07a5433 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit f71fdaf79bda6704ae6dd1360406393c90026de5
author bgruening
date Mon, 11 Jul 2022 14:13:13 +0000
parents
children 3fba9c77550a
comparison
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2:ad1149b4f795 3:8ccbf07a5433
1 +++Summary+++:
2 # scaffolds: 2
3 Total scaffold length: 839152
4 Average scaffold length: 419576.00
5 Scaffold N50: 419576
6 Scaffold auN: 419576.00
7 Scaffold L50: 1
8 Largest scaffold: 419576
9 Smallest scaffold: 419576
10 # contigs: 2
11 Total contig length: 839152
12 Average contig length: 419576.00
13 Contig N50: 419576
14 Contig auN: 419576.00
15 Contig L50: 1
16 Largest contig: 419576
17 Smallest contig: 419576
18 # gaps in scaffolds: 0
19 Total gap length in scaffolds: 0
20 Average gap length in scaffolds: 0.00
21 Gap N50 in scaffolds: 0
22 Gap auN in scaffolds: 0.00
23 Gap L50 in scaffolds: 0
24 Largest gap in scaffolds: 0
25 Smallest gap in scaffolds: 0
26 Base composition (A:C:G:T): 204288:225102:209720:200042
27 GC content %: 51.82
28 # soft-masked bases: 0
29 # segments: 1
30 Total segment length: 419576
31 Average segment length: 419576.00
32 # gaps: 0
33 # paths: 2
34 Scaffold N10: 419576
35 Scaffold N20: 419576
36 Scaffold N30: 419576
37 Scaffold N40: 419576
38 Scaffold N50: 419576
39 Scaffold N60: 419576
40 Scaffold N70: 419576
41 Scaffold N80: 419576
42 Scaffold N90: 419576
43 Scaffold N100: 419576
44 Scaffold L10: 1
45 Scaffold L20: 1
46 Scaffold L30: 1
47 Scaffold L40: 1
48 Scaffold L50: 1
49 Scaffold L60: 2
50 Scaffold L70: 2
51 Scaffold L80: 2
52 Scaffold L90: 2
53 Scaffold L100: 2
54 Contig N10: 419576
55 Contig N20: 419576
56 Contig N30: 419576
57 Contig N40: 419576
58 Contig N50: 419576
59 Contig N60: 419576
60 Contig N70: 419576
61 Contig N80: 419576
62 Contig N90: 419576
63 Contig N100: 419576
64 Contig L10: 1
65 Contig L20: 1
66 Contig L30: 1
67 Contig L40: 1
68 Contig L50: 1
69 Contig L60: 2
70 Contig L70: 2
71 Contig L80: 2
72 Contig L90: 2
73 Contig L100: 2
74 Gap N10: 0
75 Gap N20: 0
76 Gap N30: 0
77 Gap N40: 0
78 Gap N50: 0
79 Gap N60: 0
80 Gap N70: 0
81 Gap N80: 0
82 Gap N90: 0
83 Gap N100: 0
84 Gap L10: 0
85 Gap L20: 0
86 Gap L30: 0
87 Gap L40: 0
88 Gap L50: 0
89 Gap L60: 0
90 Gap L70: 0
91 Gap L80: 0
92 Gap L90: 0
93 Gap L100: 0