Mercurial > repos > bgruening > gfastats

diff gfastats.xml @ 2:ad1149b4f795 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 0c9612e0257a872892894530669785d1e02aaacc
author bgruening
date Wed, 01 Jun 2022 15:15:57 +0000
parents 2b8b4cacb83d
children 8ccbf07a5433
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--- a/gfastats.xml	Mon Apr 25 09:38:18 2022 +0000
+++ b/gfastats.xml	Wed Jun 01 15:15:57 2022 +0000
@@ -75,7 +75,7 @@
             </param>
             <when value="false"/>
             <when value="true">
-                <param name="target_sequence" type="text" value="" label="Target sequence" help="Target specific sequence by header, optionally with coordinates: header[:start-end]">
+                <param name="target_sequence" type="text" value="" label="Target sequence" optional="true" help="Target specific sequence by header, optionally with coordinates: header[:start-end]">
                     <sanitizer invalid_char="">
                         <valid initial="string.digits,string.letters">
                             <add value=":"/>
@@ -325,6 +325,15 @@
             </conditional>
             <output name="output" value="test_10.gfa" ftype="gfa1"/>
         </test>
+        <!--Test 11 -->
+        <test expect_num_outputs="1">
+            <param name="input_file" value="dataset_03.fasta"/>
+            <conditional name="target_condition">
+                <param name="target_option" value="true"/>
+                <param name="include_bed" value="regions.bed"/>
+            </conditional>
+            <output name="stats" value="test_11_stats.tabular" ftype="tabular"/>
+        </test>
     </tests>
     <help><![CDATA[