Mercurial > repos > bgruening > gfastats
view test-data/test_12_stats.tabular @ 6:690c2caa367e draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 10ccc47885ce71e602d66e157bd475f1facbd042
author | bgruening |
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date | Mon, 05 Dec 2022 12:20:31 +0000 |
parents | 3fba9c77550a |
children |
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+++Assembly summary+++: # scaffolds: 2 Total scaffold length: 839152 Average scaffold length: 419576.00 Scaffold N50: 419576 Scaffold auN: 419576.00 Scaffold L50: 1 Largest scaffold: 419576 Smallest scaffold: 419576 # contigs: 2 Total contig length: 839152 Average contig length: 419576.00 Contig N50: 419576 Contig auN: 419576.00 Contig L50: 1 Largest contig: 419576 Smallest contig: 419576 # gaps in scaffolds: 0 Total gap length in scaffolds: 0 Average gap length in scaffolds: 0.00 Gap N50 in scaffolds: 0 Gap auN in scaffolds: 0.00 Gap L50 in scaffolds: 0 Largest gap in scaffolds: 0 Smallest gap in scaffolds: 0 Base composition (A:C:G:T): 204288:225102:209720:200042 GC content %: 51.82 # soft-masked bases: 0 # segments: 1 Total segment length: 419576 Average segment length: 419576.00 # gaps: 0 # paths: 2 Scaffold N10: 419576 Scaffold N20: 419576 Scaffold N30: 419576 Scaffold N40: 419576 Scaffold N50: 419576 Scaffold N60: 419576 Scaffold N70: 419576 Scaffold N80: 419576 Scaffold N90: 419576 Scaffold N100: 419576 Scaffold L10: 1 Scaffold L20: 1 Scaffold L30: 1 Scaffold L40: 1 Scaffold L50: 1 Scaffold L60: 2 Scaffold L70: 2 Scaffold L80: 2 Scaffold L90: 2 Scaffold L100: 2 Contig N10: 419576 Contig N20: 419576 Contig N30: 419576 Contig N40: 419576 Contig N50: 419576 Contig N60: 419576 Contig N70: 419576 Contig N80: 419576 Contig N90: 419576 Contig N100: 419576 Contig L10: 1 Contig L20: 1 Contig L30: 1 Contig L40: 1 Contig L50: 1 Contig L60: 2 Contig L70: 2 Contig L80: 2 Contig L90: 2 Contig L100: 2 Gap N10: 0 Gap N20: 0 Gap N30: 0 Gap N40: 0 Gap N50: 0 Gap N60: 0 Gap N70: 0 Gap N80: 0 Gap N90: 0 Gap N100: 0 Gap L10: 0 Gap L20: 0 Gap L30: 0 Gap L40: 0 Gap L50: 0 Gap L60: 0 Gap L70: 0 Gap L80: 0 Gap L90: 0 Gap L100: 0