Mercurial > repos > bgruening > gfstats
diff test-data/test_04_stats.tabular @ 0:5f250ffcb1af draft default tip
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/gfastats commit 6ca9363cc4e0da886aab9accd79d52663247af29"
| author | bgruening |
|---|---|
| date | Tue, 08 Mar 2022 21:49:13 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test_04_stats.tabular Tue Mar 08 21:49:13 2022 +0000 @@ -0,0 +1,132 @@ +Expected genome size 600000 +# scaffolds 3 +Total scaffold length 419576 +Average scaffold length 139858.67 +Scaffold N50 417540 +Scaffold auN 415520.91 +Scaffold L50 1 +Scaffold NG50 417540 +Scaffold auNG 290571.00 +Scaffold LG50 1 +Largest scaffold 417540 +# contigs 6 +Total contig length 419573 +Average contig length 69928.83 +Contig N50 416949 +Contig auN 414345.81 +Contig L50 1 +Contig NG50 416949 +Contig auNG 289747.19 +Contig LG50 1 +Largest contig 416949 +# gaps 3 +Total gap length 3 +Average gap length 1.00 +Gap N50 1 +Gap auN 1.00 +Gap L50 2 +Largest gap 1 +Base composition (ACGT) 102144, 112550, 104859, 100020 +GC content % 51.82 +# soft-masked bases 0 +# paths 3 +Scaffold N10 417540 +Scaffold N20 417540 +Scaffold N30 417540 +Scaffold N40 417540 +Scaffold N50 417540 +Scaffold N60 417540 +Scaffold N70 417540 +Scaffold N80 417540 +Scaffold N90 417540 +Scaffold N100 356 +Scaffold L10 1 +Scaffold L20 1 +Scaffold L30 1 +Scaffold L40 1 +Scaffold L50 1 +Scaffold L60 1 +Scaffold L70 1 +Scaffold L80 1 +Scaffold L90 1 +Scaffold L100 3 +Scaffold NG10 417540 +Scaffold NG20 417540 +Scaffold NG30 417540 +Scaffold NG40 417540 +Scaffold NG50 417540 +Scaffold NG60 417540 +Scaffold NG70 0 +Scaffold NG80 0 +Scaffold NG90 0 +Scaffold NG100 0 +Scaffold LG10 1 +Scaffold LG20 1 +Scaffold LG30 1 +Scaffold LG40 1 +Scaffold LG50 1 +Scaffold LG60 1 +Scaffold LG70 0 +Scaffold LG80 0 +Scaffold LG90 0 +Scaffold LG100 0 +Contig N10 416949 +Contig N20 416949 +Contig N30 416949 +Contig N40 416949 +Contig N50 416949 +Contig N60 416949 +Contig N70 416949 +Contig N80 416949 +Contig N90 416949 +Contig N100 101 +Contig L10 1 +Contig L20 1 +Contig L30 1 +Contig L40 1 +Contig L50 1 +Contig L60 1 +Contig L70 1 +Contig L80 1 +Contig L90 1 +Contig L100 6 +Contig NG10 416949 +Contig NG20 416949 +Contig NG30 416949 +Contig NG40 416949 +Contig NG50 416949 +Contig NG60 416949 +Contig NG70 0 +Contig NG80 0 +Contig NG90 0 +Contig NG100 0 +Contig LG10 1 +Contig LG20 1 +Contig LG30 1 +Contig LG40 1 +Contig LG50 1 +Contig LG60 1 +Contig LG70 0 +Contig LG80 0 +Contig LG90 0 +Contig LG100 0 +Gap N10 1 +Gap N20 1 +Gap N30 1 +Gap N40 1 +Gap N50 1 +Gap N60 1 +Gap N70 1 +Gap N80 1 +Gap N90 1 +Gap N100 1 +Gap L10 1 +Gap L20 1 +Gap L30 1 +Gap L40 2 +Gap L50 2 +Gap L60 2 +Gap L70 3 +Gap L80 3 +Gap L90 3 +Gap L100 3