Mercurial > repos > bgruening > glimmer_gene_calling_workflow
diff glimmer3_with_trainingset.ga @ 6:9d5515db5920 draft default tip
Uploaded
author | bgruening |
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date | Fri, 23 Aug 2013 02:54:15 -0400 |
parents | 2405efd751a0 |
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--- a/glimmer3_with_trainingset.ga Mon Aug 12 12:56:19 2013 -0400 +++ b/glimmer3_with_trainingset.ga Fri Aug 23 02:54:15 2013 -0400 @@ -1,16 +1,16 @@ { "a_galaxy_workflow": "true", - "annotation": "", + "annotation": "Runs Glimmer3 to predict genes in microbial DNA using a training set of known genes.<br />\n<br />\nThis workflow is <a href=\"http://toolshed.g2.bx.psu.edu/view/bgruening/glimmer_gene_calling_workflow\" target=\"_blank\">available on the Galaxy Tool Shed</a> with a README file giving more information including sample data, and full citation details (Cock et al. 2013).", "format-version": "0.1", "name": "Glimmer gene calling with trainingset.", "steps": { "0": { - "annotation": "The set of genes is used to train the gene calling of glimmer.", + "annotation": "Nucleotide FASTA file of gene sequences used to train the gene calling of glimmer.", "id": 0, "input_connections": {}, "inputs": [ { - "description": "The set of genes is used to train the gene calling of glimmer.", + "description": "Nucleotide FASTA file of gene sequences used to train the gene calling of glimmer.", "name": "Set of Genes" } ], @@ -28,12 +28,12 @@ "user_outputs": [] }, "1": { - "annotation": "", + "annotation": "Nucleotide FASTA file of genomic DNA (e.g. assembled contigs) to find genes in.", "id": 1, "input_connections": {}, "inputs": [ { - "description": "", + "description": "Nucleotide FASTA file of genomic DNA (e.g. assembled contigs) to find genes in.", "name": "Input Genomic Sequence" } ],