# HG changeset patch
# User bgruening
# Date 1376326579 14400
# Node ID 2405efd751a01b492ee65ef6b90309ec5f8ec8df
# Parent  22bfc027a7182de45be4951fb96f91a68918d9f5
Uploaded

diff -r 22bfc027a718 -r 2405efd751a0 glimmer3_with_trainingset.ga
--- a/glimmer3_with_trainingset.ga	Mon Aug 12 12:08:47 2013 -0400
+++ b/glimmer3_with_trainingset.ga	Mon Aug 12 12:56:19 2013 -0400
@@ -17,8 +17,8 @@
             "name": "Input dataset", 
             "outputs": [], 
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-                "top": 376
+                "left": 235.60880279541016, 
+                "top": 214.3896484375
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             "tool_errors": null, 
             "tool_id": null, 
@@ -40,8 +40,8 @@
             "name": "Input dataset", 
             "outputs": [], 
             "position": {
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-                "top": 232
+                "left": 454.55167388916016, 
+                "top": 215.35415649414062
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             "tool_errors": null, 
             "tool_id": null, 
@@ -68,13 +68,19 @@
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-                "top": 486
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+                "top": 555.8248291015625
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-            "post_job_actions": {}, 
+            "post_job_actions": {
+                "HideDatasetActionoutfile": {
+                    "action_arguments": {}, 
+                    "action_type": "HideDatasetAction", 
+                    "output_name": "outfile"
+                }
+            }, 
             "tool_errors": null, 
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             "type": "tool", 
             "user_outputs": []
@@ -109,19 +115,19 @@
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-                "top": 319
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+            "tool_state": "{\"extend\": \"\\\"False\\\"\", \"__page__\": 0, \"linear\": \"\\\"True\\\"\", \"detailed_report\": \"\\\"False\\\"\", \"seq_input\": \"null\", \"__rerun_remap_job_id__\": null, \"gc_percent\": \"\\\"0.0\\\"\", \"start_codons\": \"\\\"atg,gtg,ttg\\\"\", \"threshold\": \"\\\"30\\\"\", \"stop_codon_opts\": \"{\\\"genbank_gencode\\\": \\\"11\\\", \\\"__current_case__\\\": 0, \\\"stop_codon_opts_selector\\\": \\\"gb\\\"}\", \"max_olap\": \"\\\"50\\\"\", \"no_indep\": \"\\\"False\\\"\", \"gene_len\": \"\\\"90\\\"\", \"report\": \"\\\"False\\\"\", \"chromInfo\": \"\\\"/home/bag/projects/galaxy/galaxy-dist/tool-data/shared/ucsc/chrom/?.len\\\"\", \"icm_input\": \"null\"}", 
             "tool_version": "0.2", 
             "type": "tool", 
             "user_outputs": []
         }, 
         "4": {
-            "annotation": "", 
+            "annotation": "We expect our input sequences to have a trailing stop codon, but do not want the star character in the protein output.", 
             "id": 4, 
             "input_connections": {
                 "input1": {
@@ -138,16 +144,16 @@
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-}
+}
\ No newline at end of file