diff test-data/glimmer.gff @ 0:9b2e283dc3b5 draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/glimmer commit 37388949e348d221170659bbee547bf4ac67ef1a
author bgruening
date Tue, 28 Nov 2017 10:10:55 -0500
parents
children ce89c473666d
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/glimmer.gff	Tue Nov 28 10:10:55 2017 -0500
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+##gff-version 3
+
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	897	2918	.	+	.	frame=+3;score=3.19
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	144	938	.	-	.	frame=-3;score=2.86
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	7237	7368	.	-	.	frame=-1;score=2.50
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	10347	11945	.	+	.	frame=+3;score=2.93
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	12110	12238	.	-	.	frame=-2;score=6.22
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	13067	15088	.	-	.	frame=-2;score=2.95
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	15045	16529	.	+	.	frame=+3;score=3.36
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	20276	21385	.	-	.	frame=-2;score=2.90
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	21382	23037	.	-	.	frame=-1;score=2.93
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	23031	24797	.	+	.	frame=+3;score=2.92
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	27115	27291	.	-	.	frame=-1;score=1.92
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	28556	28960	.	+	.	frame=+2;score=2.51
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	29040	30026	.	+	.	frame=+3;score=0.40
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	32942	33151	.	-	.	frame=-2;score=1.06
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	34754	38242	.	-	.	frame=-2;score=2.97
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	43100	43300	.	-	.	frame=-2;score=6.70
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	43402	43497	.	+	.	frame=+1;score=0.97
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	44963	45157	.	-	.	frame=-2;score=1.68
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	46852	47430	.	-	.	frame=-1;score=0.78
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	48354	51314	.	-	.	frame=-3;score=2.96
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	55069	55329	.	-	.	frame=-1;score=1.43
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	56431	59457	.	-	.	frame=-1;score=2.96
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	59669	60169	.	+	.	frame=+2;score=2.15
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	60516	60881	.	+	.	frame=+3;score=0.34
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	60959	62032	.	-	.	frame=-2;score=2.90
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	61997	62821	.	+	.	frame=+2;score=3.73
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	62922	66395	.	-	.	frame=-3;score=2.97
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	70996	71166	.	+	.	frame=+1;score=0.90
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	81835	81960	.	-	.	frame=-1;score=1.90
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	87355	89982	.	+	.	frame=+1;score=2.96
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	90028	90390	.	+	.	frame=+1;score=1.66
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	91917	92009	.	+	.	frame=+3;score=0.65
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	93307	93540	.	-	.	frame=-1;score=1.81
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	94568	96379	.	-	.	frame=-2;score=2.94
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	96383	96523	.	-	.	frame=-2;score=0.37
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	99628	100467	.	+	.	frame=+1;score=3.23
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	98455	99645	.	-	.	frame=-1;score=2.91
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	100811	102931	.	+	.	frame=+2;score=2.95
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	103074	105521	.	+	.	frame=+3;score=2.96
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	105847	106200	.	-	.	frame=-1;score=0.32
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	108069	108365	.	-	.	frame=-3;score=4.89
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	109947	110498	.	-	.	frame=-3;score=0.90
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	110791	110907	.	-	.	frame=-1;score=2.13
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	116538	117071	.	-	.	frame=-3;score=0.81
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	117443	117733	.	-	.	frame=-2;score=0.01
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	118399	118776	.	-	.	frame=-1;score=3.59
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	119582	119740	.	-	.	frame=-2;score=0.41
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	123152	123484	.	+	.	frame=+2;score=2.86
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	123767	123925	.	+	.	frame=+2;score=0.89
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	124906	126459	.	-	.	frame=-1;score=2.93
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	126704	128992	.	-	.	frame=-2;score=2.95
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	129011	129178	.	-	.	frame=-2;score=1.85
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	130337	132172	.	-	.	frame=-2;score=2.94
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	134993	136987	.	+	.	frame=+2;score=2.94
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	137245	137523	.	-	.	frame=-1;score=1.14
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	137825	140512	.	-	.	frame=-2;score=2.96
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	140766	142487	.	-	.	frame=-3;score=2.94
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	142484	143056	.	-	.	frame=-2;score=0.89
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	143099	143578	.	-	.	frame=-2;score=0.42
+gi|333028963|ref|NZ_CM001166.1| Streptomyces sp. Tu6071 plasmid pTu6071, whole genome shotgun sequence	glimmer_prediction	predicted_gene	144230	147016	.	-	.	frame=-2;score=2.96