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comparison graphmap_owler.xml @ 1:815251b32ccc draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/graphmap commit ba787e88cb93e78516b2fced5b60285d5f033ca3
author bgruening
date Fri, 15 Mar 2024 13:12:39 +0000
parents d0a712cf0518
children
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0:d0a712cf0518 1:815251b32ccc
1 <tool id="graphmap_overlap" name="Owler" version="@VERSION@"> 1 <tool id="graphmap_overlap" name="Owler" version="@VERSION@">
2 <description>fast, trimmed overlap pipeline without aligning</description> 2 <description>fast, trimmed overlap pipeline without aligning</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="xrefs" />
6 <expand macro="requirements" /> 7 <expand macro="requirements" />
7 <command detect_errors="exit_code"> 8 <command detect_errors="exit_code">
8 <![CDATA[ 9 <![CDATA[
9 ln -s '$r' ref.${r.ext} && 10 ln -s '$r' ref.${r.ext} &&
10 ln -s '$d' reads.${d.ext} && 11 ln -s '$d' reads.${d.ext} &&