Mercurial > repos > bgruening > hicexplorer_chicplotviewpoint
comparison test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_rejected.txt @ 3:dbf82dd7bdb3 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
author | iuc |
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date | Tue, 24 Mar 2020 14:12:09 -0400 |
parents | 136ebddd6ec3 |
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2:136ebddd6ec3 | 3:dbf82dd7bdb3 |
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1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 | 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3 |
2 # This file contains the p-values computed by chi2 test | 2 # This file contains the p-values computed by chi2 test |
3 # To test the smoothed (float) values they were rounded up to the next integer | 3 # To test the smoothed (float) values they were rounded up to the next integer |
4 # | 4 # |
5 # Alpha level 0.5 | 5 # Alpha level 0.5 |
6 # Degrees of freedom 1 | 6 # Degrees of freedom 1 |
7 # | 7 # |
8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 | 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 |
9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 | 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 |
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value | 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value |
11 chr1 14331000 14344000 Eya1 43000 673.00000 11.20000 832.00000 22.80000 0.17177 | 11 chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00335 |
12 chr1 14444000 14467000 Eya1 166000 673.00000 10.00000 832.00000 25.00000 0.05733 | |
13 chr1 14476000 14501000 Eya1 200000 673.00000 30.25000 832.00000 26.15000 0.18635 |