Mercurial > repos > bgruening > hicexplorer_chicqualitycontrol

comparison test-data/hicInfo/hicInfo_output.txt @ 8:b892fa1fcaec draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 07802a6bd441d9da888cfb8283f8c2135704f7c9
author iuc
date Wed, 18 Oct 2023 10:54:38 +0000
parents feb7f62a0ff9
children a63e9713c39d
comparison
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7:fadd03fbc4f5 8:b892fa1fcaec
1 # Matrix information file. Created with HiCExplorer's hicInfo version 3.4 1 # Matrix information file. Created with HiCExplorer's hicInfo version 3.7.2
2 File: matrix_name.h5 2 File: matrix_name.h5
3 Size: 33,754 3 Size: 33,754
4 Bin_length: 5000 4 Bin_length: 5000
5 Sum of matrix: 35778.0 5 Sum of matrix: 37321.0
6 Chromosomes:length: chr2L: 23011544 bp; chr2LHet: 368872 bp; chr2R: 21146708 bp; chr2RHet: 3288761 bp; chr3L: 24543557 bp; chr3LHet: 2555491 bp; chr3R: 27905053 bp; chr3RHet: 2517507 bp; chr4: 1351857 bp; chrM: 19517 bp; chrUextra: 29004656 bp; chrU: 10049037 bp; chrX: 22422827 bp; chrXHet: 204112 bp; chrYHet: 347038 bp; 6 Chromosomes:length: chr2L: 23011544 bp; chr2LHet: 368872 bp; chr2R: 21146708 bp; chr2RHet: 3288761 bp; chr3L: 24543557 bp; chr3LHet: 2555491 bp; chr3R: 27905053 bp; chr3RHet: 2517507 bp; chr4: 1351857 bp; chrM: 19517 bp; chrUextra: 29004656 bp; chrU: 10049037 bp; chrX: 22422827 bp; chrXHet: 204112 bp; chrYHet: 347038 bp;
7 Non-zero elements: 69,213 7 Non-zero elements: 69,213
8 Minimum (non zero): 1 8 Minimum (non zero): 1
9 Maximum: 8 9 Maximum: 8
10 NaN bins: 0 10 NaN bins: 0