Mercurial > repos > bgruening > hicexplorer_chicviewpointbackgroundmodel
view test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt @ 3:7fe1a401d833 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
author | iuc |
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date | Tue, 24 Mar 2020 14:22:19 -0400 |
parents | b9cdce1e57a1 |
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# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3 # This file contains the p-values computed by fisher test # To test the smoothed (float) values they were rounded up to the next integer # # Alpha level 0.5 # Degrees of freedom 1 # # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00366 chr1 14290000 14439000 Eya1 138000 673.00000 523.00000 832.00000 645.00000 1.00000 chr1 14444000 14467000 Eya1 166000 673.00000 10.00000 832.00000 25.00000 0.06013 chr1 14476000 14501000 Eya1 200000 673.00000 30.25000 832.00000 26.15000 0.22603