Mercurial > repos > bgruening > hicexplorer_hicaggregatecontacts
comparison test-data/cHi-C/chicQualityControl/new_referencepoints.bed_report @ 8:4ba4b59dcff1 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
author | iuc |
---|---|
date | Tue, 24 Mar 2020 14:16:23 -0400 |
parents | |
children | ee370ade24cd |
comparison
equal
deleted
inserted
replaced
7:7066a1eda176 | 8:4ba4b59dcff1 |
---|---|
1 # Created with chicQualityControl version 3.4.3 | |
2 # QC report for matrices: 0_matrix.cool 1_matrix.cool | |
3 #Sparsity threshold for rejection: sparsity <= 0.05 are rejected. | |
4 | |
5 Number of reference points: 43 | |
6 Number of accepted reference points: 35 | |
7 Number of rejected reference points: 8 | |
8 Number of faulty reference points: 0 | |
9 | |
10 | |
11 A faulty reference point is caused by the non-presence of the chromosome in one of the given matrices. | |
12 It can also be caused by the non-presence of valid Hi-C reads in a region, especially at the chromosome ends. | |
13 Please check the results of hicInfo to validate this for your data. |