Mercurial > repos > bgruening > hicexplorer_hicbuildmatrix
comparison test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_results.txt @ 16:6152fc6da3dc draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
author | iuc |
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date | Tue, 24 Mar 2020 13:59:34 -0400 |
parents | 231687cac31b |
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15:231687cac31b | 16:6152fc6da3dc |
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1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 | 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3 |
2 # This file contains the p-values computed by chi2 test | 2 # This file contains the p-values computed by chi2 test |
3 # To test the smoothed (float) values they were rounded up to the next integer | 3 # To test the smoothed (float) values they were rounded up to the next integer |
4 # | 4 # |
5 # Alpha level 0.5 | 5 # Alpha level 0.5 |
6 # Degrees of freedom 1 | 6 # Degrees of freedom 1 |
7 # | 7 # |
8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0 | 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0 |
9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0 | 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0 |
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value | 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value |
11 chr1 19122000 19131000 Tfap2d 37000 472.00000 10.20000 800.00000 15.80000 0.82442 | 11 chr1 19077000 19118000 Tfap2d 24000 472.00000 349.00000 800.00000 534.00000 0.25577 |
12 chr1 19188000 19232000 Tfap2d 138000 472.00000 23.40000 800.00000 115.00000 0.00000 | 12 chr1 19120000 19274000 Tfap2d 180000 472.00000 86.00000 800.00000 214.00000 0.00599 |