Mercurial > repos > bgruening > hicexplorer_hiccomparematrices

comparison macros.xml @ 12:826a6ac07f93 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit fa140a9f660eab2459e21b0b637b129d7de24c02
author iuc
date Tue, 10 Jan 2023 19:14:50 +0000
parents 80abd5e2922a
children 3ee5332bf57c
comparison
equal deleted inserted replaced
11:80abd5e2922a 12:826a6ac07f93
1 <macros> 1 <macros>
2 <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token> 2 <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token>
3 <token name="@TOOL_VERSION@">3.6</token> 3 <token name="@TOOL_VERSION@">3.6</token>
4 <token name="@VERSION_SUFFIX@">0</token> 4 <token name="@VERSION_SUFFIX@">1</token>
5 <token name="@USE_RANGE@"> 5 <token name="@USE_RANGE@">
6 #if $use_range.select_use_range == "yes_use_range": 6 #if $use_range.select_use_range == "yes_use_range":
7 --range $use_range.range_min:$use_range.range_max 7 --range $use_range.range_min:$use_range.range_max
8 #end if 8 #end if
9 </token> 9 </token>
331 <xml name="scaleFactor"> 331 <xml name="scaleFactor">
332 <param name="scaleFactor1" type="float" value="1" label="Scale factor for treatment" help="(--scaleFactors)" /> 332 <param name="scaleFactor1" type="float" value="1" label="Scale factor for treatment" help="(--scaleFactors)" />
333 <param name="scaleFactor2" type="float" value="1" label="Scale factor for input" help="(--scaleFactors)" /> 333 <param name="scaleFactor2" type="float" value="1" label="Scale factor for input" help="(--scaleFactors)" />
334 </xml> 334 </xml>
335 <xml name="xMax"> 335 <xml name="xMax">
336 <param argument="--xMax" name="xMax" type="integer" optional="true" value="" label="Max value for the x-axis in counts per bin" /> 336 <param argument="--xMax" type="integer" optional="true" value="" label="Max value for the x-axis in counts per bin" />
337 </xml> 337 </xml>
338 <xml name="filterThreshold"> 338 <xml name="filterThreshold">
339 <param argument="--filterThreshold" name="filterThreshold_low" type="float" value="-1.5" label="Remove bins of low coverage" help="e.g. -1.5; Both Thresholds needs to be set to take effect." /> 339 <param argument="--filterThreshold" name="filterThreshold_low" type="float" value="-1.5" label="Remove bins of low coverage" help="e.g. -1.5; Both Thresholds needs to be set to take effect." />
340 <param argument="--filterThreshold" name="filterThreshold_large" type="float" value="5.0" label="Remove bins of large coverage" help="e.g. 5; Both Thresholds needs to be set to take effect." /> 340 <param argument="--filterThreshold" name="filterThreshold_large" type="float" value="5.0" label="Remove bins of large coverage" help="e.g. 5; Both Thresholds needs to be set to take effect." />
341 </xml> 341 </xml>