Mercurial > repos > bgruening > hicexplorer_hicplotmatrix
comparison hicPlotMatrix.xml @ 14:fe13295d0329 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author | bgruening |
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date | Wed, 05 Feb 2020 19:59:32 -0500 |
parents | 40b33e101621 |
children | b553d14a7845 |
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13:40b33e101621 | 14:fe13295d0329 |
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33 $clearMaskedBins | 33 $clearMaskedBins |
34 | 34 |
35 ## special: --chromosomeOrder is optional, but if given needs at least one argument | 35 ## special: --chromosomeOrder is optional, but if given needs at least one argument |
36 #set chroms = ' '.join([ '\'' + str($var.chromosome) + '\'' for $var in $chromosomeOrder ]) | 36 #set chroms = ' '.join([ '\'' + str($var.chromosome) + '\'' for $var in $chromosomeOrder ]) |
37 #if chroms: | 37 #if chroms: |
38 --chromosomeOrder "$chroms" | 38 --chromosomeOrder $chroms |
39 #end if | 39 #end if |
40 | 40 |
41 #if $region: | 41 #if $region: |
42 --region '$region' | 42 --region '$region' |
43 #end if | 43 #end if |