Mercurial > repos > bgruening > hicexplorer_hicsummatrices
diff hicSumMatrices.xml @ 19:5aa5ef83f975 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 2a0943e78bdc8ebb13f181399206a9eea37ed78f"
| author | iuc |
|---|---|
| date | Tue, 16 Mar 2021 15:39:40 +0000 |
| parents | e89bc5e38823 |
| children | 36dfa2825a59 |
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--- a/hicSumMatrices.xml Fri Dec 11 21:32:29 2020 +0000 +++ b/hicSumMatrices.xml Tue Mar 16 15:39:40 2021 +0000 @@ -1,4 +1,4 @@ -<tool id="hicexplorer_hicsummatrices" name="@BINARY@" version="@WRAPPER_VERSION@.0"> +<tool id="hicexplorer_hicsummatrices" name="@BINARY@" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@"> <description>combine Hi-C matrices of the same size</description> <macros> <token name="@BINARY@">hicSumMatrices</token> @@ -20,32 +20,31 @@ ]]> </command> <inputs> - <expand macro='matrix_h5_cooler_multiple_macro'/> + <expand macro='matrix_h5_cooler_multiple_macro' /> </inputs> <outputs> - <data name="outFileName" from_work_dir="matrix" format_source='matrix_h5_cooler_multiple'/> + <data name="outFileName" from_work_dir="matrix" format_source='matrix_h5_cooler_multiple' /> </outputs> <tests> <test> - <param name="matrix_h5_cooler_multiple" value="small_test_matrix.h5,small_test_matrix.h5"/> - + <param name="matrix_h5_cooler_multiple" value="small_test_matrix.h5,small_test_matrix.h5" /> <output name="outFileName" ftype="h5"> <assert_contents> - <has_h5_keys keys='intervals,matrix'/> + <has_h5_keys keys='intervals,matrix' /> </assert_contents> </output> </test> - <test> - <param name="matrix_h5_cooler_multiple" value="small_test_matrix.cool,small_test_matrix.cool"/> - + <test> + <param name="matrix_h5_cooler_multiple" value="small_test_matrix.cool,small_test_matrix.cool" /> <output name="outFileName" ftype="cool"> <assert_contents> - <has_h5_keys keys='bins,chroms,indexes,pixels'/> + <has_h5_keys keys='bins,chroms,indexes,pixels' /> </assert_contents> </output> </test> </tests> <help><![CDATA[ + Summation of matrices ===================== @@ -74,6 +73,6 @@ | For more information about HiCExplorer please consider our documentation on readthedocs.io_ .. _readthedocs.io: http://hicexplorer.readthedocs.io/en/latest/index.html -]]></help> +]]> </help> <expand macro="citations" /> </tool>